Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Genome size (bp): 2410873
Number of genes 2268
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 0 kb Terminus 793 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1528.128 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1277.96 kb
Consensus predictions: Origin 0 kb Terminus 793 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew reverse | 1615 | NA | 924 |
| AT-skew forward | 402 | NA | 832 |
| AT-skew reverse | 1717 | NA | 1123 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew reverse | 1211 (0 kb) | 1615 (924.322 kb) | leading | 0.06 |
| 1616 (927.9225 kb) | 2268 (2410.634 kb) | lagging | -0.142 | |
| AT-skew forward | 1 (0 kb) | 402 (832.281 kb) | leading | -0.256 |
| 403 (833.744 kb) | 1210 (2410.634 kb) | lagging | 0.007 | |
| AT-skew reverse | 1211 (0 kb) | 1717 (1123.2375 kb) | NA | 0.134 |
| 1718 (1130.5775 kb) | 2268 (2410.634 kb) | lagging | 0.363 |
More G than C on the leading strand for replication - for reverse encoded genes.