Rearranged Oriloc output example: Previous Index Next
Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.
Genome size (bp): 1709204
Number of genes 1810
Oriloc predictions: Origin 0 kb Terminus 848 kb
Worning et al., 2006: Origin 1708 kb Terminus 858 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1220.397 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 527.02 kb
Consensus predictions: Origin 0 kb Terminus 848 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew reverse | 1340 | NA | 833 |
| AT-skew forward | 449 | NA | 841 |
| AT-skew reverse | 1332 | NA | 825 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew reverse | 884 (0 kb) | 1340 (832.5895 kb) | leading | 0.01 |
| 1341 (835.954 kb) | 1810 (1709.066 kb) | lagging | -0.191 | |
| AT-skew forward | 1 (0 kb) | 449 (840.6295 kb) | leading | -0.044 |
| 450 (843.96 kb) | 883 (1709.066 kb) | lagging | 0.018 | |
| AT-skew reverse | 884 (0 kb) | 1332 (825.346 kb) | leading | -0.035 |
| 1333 (827.3305 kb) | 1810 (1709.066 kb) | lagging | 0.039 |
More G than C on the leading strand for replication - for reverse encoded genes.