Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5228663
Number of genes 5286
Oriloc predictions: Origin 0 kb Terminus 2489 kb
Worning et al., 2006: Origin 1 kb Terminus 2507 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5200.681 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2489 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 373 | NA | 510 |
| 1844 | NA | 2495 | |
| GC-skew reverse | 3173 | NA | 2498 |
| AT-skew forward | 1833 | NA | 2480 |
| AT-skew reverse | 3278 | NA | 2629 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 373 (510.0975 kb) | leading | 0.236 |
| 374 (512.7405 kb) | 1844 (2494.7715 kb) | leading | 0.355 | |
| 1845 (2495.1975 kb) | 2556 (5228.506 kb) | lagging | -0.121 | |
| GC-skew reverse | 2557 (0 kb) | 3173 (2497.537 kb) | leading | 0.118 |
| 3174 (2506.3505 kb) | 5286 (5228.506 kb) | lagging | -0.312 | |
| AT-skew forward | 1 (0 kb) | 1833 (2479.965 kb) | leading | 0.038 |
| 1834 (2481.8915 kb) | 2556 (5228.506 kb) | lagging | 0.003 | |
| AT-skew reverse | 2557 (0 kb) | 3278 (2629.2945 kb) | leading | 0 |
| 3279 (2630.271 kb) | 5286 (5228.506 kb) | lagging | -0.037 |
More G than C on the leading strand for replication.