Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5227419
Number of genes 5307
Oriloc predictions: Origin 0 kb Terminus 2503 kb
Worning et al., 2006: Origin 1 kb Terminus 2506 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5199.436 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2503 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 380 | NA | 513 |
| 1823 | NA | 2495 | |
| GC-skew reverse | 3184 | NA | 2513 |
| AT-skew forward | 1853 | NA | 2589 |
| AT-skew reverse | 3335 | NA | 2696 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 380 (513.29 kb) | leading | 0.231 |
| 381 (514.404 kb) | 1823 (2494.85 kb) | leading | 0.36 | |
| 1824 (2495.2685 kb) | 2540 (5227.261 kb) | lagging | -0.114 | |
| GC-skew reverse | 2541 (0 kb) | 3184 (2512.7815 kb) | leading | 0.111 |
| 3185 (2513.9995 kb) | 5307 (5227.261 kb) | lagging | -0.311 | |
| AT-skew forward | 1 (0 kb) | 1853 (2588.534 kb) | leading | 0.039 |
| 1854 (2592.694 kb) | 2540 (5227.261 kb) | lagging | 0.005 | |
| AT-skew reverse | 2541 (0 kb) | 3335 (2696.359 kb) | NA | -0.001 |
| 3336 (2697.058 kb) | 5307 (5227.261 kb) | lagging | -0.038 |
More G than C on the leading strand for replication.