Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.
Genome size (bp): 3598621
Number of genes 3325
Oriloc predictions: Origin 0 kb Terminus 1847 kb
Worning et al., 2006: Origin 0 kb Terminus 1870 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 397.895 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 2585.74 kb
Consensus predictions: Origin 0 kb Terminus 1847 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1035 | 0 | 1816 |
| GC-skew reverse | 2376 | 0 | 1855 |
| AT-skew forward | 666 | 0.01333 | 1164 |
| AT-skew reverse | 2640 | 0.00667 | 2316 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1035 (1816.092 kb) | leading | 0.193 |
| 1036 (1817.195 kb) | 1737 (3598.157 kb) | lagging | -0.025 | |
| GC-skew reverse | 1738 (0 kb) | 2376 (1855.2675 kb) | leading | 0.016 |
| 2377 (1855.7825 kb) | 3325 (3598.157 kb) | lagging | -0.171 | |
| AT-skew forward | 1 (0 kb) | 666 (1164.267 kb) | leading | -0.151 |
| 667 (1164.8115 kb) | 1737 (3598.157 kb) | NA | -0.125 | |
| AT-skew reverse | 1738 (0 kb) | 2640 (2315.994 kb) | NA | 0.135 |
| 2641 (2316.677 kb) | 3325 (3598.157 kb) | lagging | 0.159 |