Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1899877
Number of genes 1886
Oriloc predictions: Origin 0 kb Terminus 890 kb
Worning et al., 2006: Origin 1898 kb Terminus 891 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1804.414 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 890 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 723 | NA | 893 |
| GC-skew reverse | 1131 | NA | 880 |
| 1450 | NA | 1273 | |
| 1785 | NA | 1714 | |
| AT-skew forward | 48 | NA | 60 |
| 169 | NA | 206 | |
| 920 | NA | 1794 | |
| AT-skew reverse | 1206 | NA | 990 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 723 (892.5765 kb) | leading | 0.051 |
| 724 (894.7505 kb) | 969 (1899.873 kb) | lagging | -0.184 | |
| GC-skew reverse | 970 (0 kb) | 1131 (880.307 kb) | leading | 0.194 |
| 1132 (886.109 kb) | 1450 (1272.8355 kb) | lagging | -0.086 | |
| 1451 (1273.938 kb) | 1785 (1714.344 kb) | lagging | -0.052 | |
| 1786 (1723.0035 kb) | 1886 (1899.873 kb) | lagging | -0.035 | |
| AT-skew forward | 1 (0 kb) | 48 (59.552 kb) | leading | -0.016 |
| 49 (59.83 kb) | 169 (206.0245 kb) | leading | -0.103 | |
| 170 (206.7705 kb) | 920 (1793.8815 kb) | NA | -0.135 | |
| 921 (1798.136 kb) | 969 (1899.873 kb) | lagging | -0.036 | |
| AT-skew reverse | 970 (0 kb) | 1206 (990.188 kb) | NA | 0.14 |
| 1207 (991.4115 kb) | 1886 (1899.873 kb) | lagging | 0.093 |