Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1928252
Number of genes 1987
Oriloc predictions: Origin 0 kb Terminus 960 kb
Worning et al., 2006: Origin 1924 kb Terminus 972 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1818.736 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 960 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 805 | NA | 950 |
| GC-skew reverse | 1246 | NA | 953 |
| 1547 | NA | 1311 | |
| 1798 | NA | 1646 | |
| AT-skew forward | 412 | NA | 532 |
| 682 | NA | 808 | |
| 991 | NA | 1812 | |
| AT-skew reverse | 1471 | NA | 1253 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 805 (949.9785 kb) | leading | 0.051 |
| 806 (952.595 kb) | 1051 (1928.218 kb) | lagging | -0.181 | |
| GC-skew reverse | 1052 (0 kb) | 1246 (952.848 kb) | leading | 0.171 |
| 1247 (957.4895 kb) | 1547 (1311.255 kb) | lagging | -0.069 | |
| 1548 (1311.693 kb) | 1798 (1645.974 kb) | lagging | -0.083 | |
| 1799 (1647.1445 kb) | 1987 (1928.218 kb) | lagging | -0.003 | |
| AT-skew forward | 1 (0 kb) | 412 (532.475 kb) | leading | -0.128 |
| 413 (533.1005 kb) | 682 (807.6085 kb) | leading | -0.111 | |
| 683 (807.8345 kb) | 991 (1812.436 kb) | NA | -0.132 | |
| 992 (1816.6505 kb) | 1051 (1928.218 kb) | lagging | -0.005 | |
| AT-skew reverse | 1052 (0 kb) | 1471 (1253.2035 kb) | NA | 0.131 |
| 1472 (1254.282 kb) | 1987 (1928.218 kb) | lagging | 0.102 |