Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Genome size (bp): 4222334
Number of genes 4152
Oriloc predictions: Origin 0 kb Terminus 2118 kb
Worning et al., 2006: Origin 1 kb Terminus 2010 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3842.647 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 2118 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1057 | NA | 1540 |
| 1474 | NA | 2122 | |
| GC-skew reverse | 2558 | NA | 2099 |
| AT-skew forward | 629 | NA | 954 |
| AT-skew reverse | 3340 | NA | 3047 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1057 (1540.473 kb) | leading | 0.049 |
| 1058 (1541.701 kb) | 1474 (2121.938 kb) | leading | 0.021 | |
| 1475 (2123.662 kb) | 1999 (4222.201 kb) | lagging | -0.066 | |
| GC-skew reverse | 2000 (0 kb) | 2558 (2099.24 kb) | leading | 0.065 |
| 2559 (2100.594 kb) | 4152 (4222.201 kb) | lagging | -0.035 | |
| AT-skew forward | 1 (0 kb) | 629 (953.544 kb) | leading | -0.022 |
| 630 (955.2415 kb) | 1999 (4222.201 kb) | NA | 0.009 | |
| AT-skew reverse | 2000 (0 kb) | 3340 (3046.995 kb) | NA | -0.013 |
| 3341 (3049.702 kb) | 4152 (4222.201 kb) | lagging | 0.02 |