Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Genome size (bp): 4202352
Number of genes 4065
Oriloc predictions: Origin 0 kb Terminus 2239 kb
Worning et al., 2006: Origin 2 kb Terminus 2243 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 496.824 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.26 kb, 3261.12 kb
Consensus predictions: Origin 0 kb Terminus 2239 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1521 | NA | 2054 |
| 1650 | NA | 2238 | |
| GC-skew reverse | 2549 | NA | 2064 |
| AT-skew forward | 504 | NA | 677 |
| AT-skew reverse | 3493 | NA | 3420 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1521 (2054.137 kb) | leading | 0.155 |
| 1522 (2055.8855 kb) | 1650 (2237.8505 kb) | leading | 0.028 | |
| 1651 (2238.925 kb) | 2111 (4202.338 kb) | lagging | -0.019 | |
| GC-skew reverse | 2112 (0 kb) | 2549 (2064.4105 kb) | leading | 0.022 |
| 2550 (2065.255 kb) | 4065 (4202.338 kb) | lagging | -0.149 | |
| AT-skew forward | 1 (0 kb) | 504 (677.206 kb) | leading | -0.04 |
| 505 (678.3605 kb) | 2111 (4202.338 kb) | NA | -0.027 | |
| AT-skew reverse | 2112 (0 kb) | 3493 (3419.768 kb) | NA | 0.017 |
| 3494 (3420.614 kb) | 4065 (4202.338 kb) | lagging | 0.039 |