Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.
Genome size (bp): 2314078
Number of genes 2380
Oriloc predictions: Origin 2280 kb Terminus 1079 kb
Worning et al., 2006: Origin 2303 kb Terminus 1052 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 376.717 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 448.65 kb
Consensus predictions: Origin 2280 kb Terminus 1079 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 544 | 0 | 1094 |
| GC-skew reverse | 1595 | 0 | 1087 |
| AT-skew forward | 574 | 0 | 1201 |
| AT-skew reverse | 1411 | 0 | 763 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 544 (1093.6305 kb) | leading | 0.097 |
| 545 (1093.8035 kb) | 1034 (2312.04 kb) | lagging | -0.084 | |
| GC-skew reverse | 1035 (0 kb) | 1595 (1087.3555 kb) | leading | 0.099 |
| 1596 (1088.5005 kb) | 2380 (2312.04 kb) | lagging | -0.071 | |
| AT-skew forward | 1 (0 kb) | 574 (1201.0155 kb) | leading | -0.11 |
| 575 (1202.9305 kb) | 1034 (2312.04 kb) | lagging | -0.038 | |
| AT-skew reverse | 1035 (0 kb) | 1411 (762.6655 kb) | leading | 0.036 |
| 1412 (766.1335 kb) | 2380 (2312.04 kb) | NA | 0.104 |
More G than C on the leading strand for replication.