Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Nocardiaceae; Nocardia.
Genome size (bp): 6021225
Number of genes 5683
Oriloc predictions: Origin NA Terminus NA
Worning et al., 2006: Origin 5845 kb Terminus 2527 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 113.434 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1 kb
Consensus predictions: Origin NA Terminus NA
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1704 | 0.00333 | 3176 |
| 1908 | 0.02333 | 3622 | |
| GC-skew reverse | 4277 | 0.04 | 3385 |
| AT-skew forward | 1059 | 0 | 1898 |
| AT-skew reverse | 4306 | 0.04 | 3453 |
| 4698 | 0 | 4128 | |
| 4813 | 0.00444 | 4218 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1704 (3175.923 kb) | NA | -0.103 |
| 1705 (3176.5625 kb) | 1908 (3621.567 kb) | NA | -0.179 | |
| 1909 (3622.7295 kb) | 2875 (6020.623 kb) | NA | -0.12 | |
| GC-skew reverse | 2876 (0 kb) | 4277 (3385.3735 kb) | NA | 0.13 |
| 4278 (3386.7075 kb) | 5683 (6020.623 kb) | NA | 0.111 | |
| AT-skew forward | 1 (0 kb) | 1059 (1898.3745 kb) | NA | -0.144 |
| 1060 (1906.6205 kb) | 2875 (6020.623 kb) | NA | -0.015 | |
| AT-skew reverse | 2876 (0 kb) | 4306 (3453.0505 kb) | NA | 0.028 |
| 4307 (3454.2405 kb) | 4698 (4127.6695 kb) | NA | 0.136 | |
| 4699 (4128.3755 kb) | 4813 (4218.3725 kb) | NA | -0.151 | |
| 4814 (4220.406 kb) | 5683 (6020.623 kb) | NA | 0.103 |