Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.
Genome size (bp): 3345687
Number of genes 2878
Oriloc predictions: Origin 8 kb Terminus 1622 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2894.446 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 8 kb Terminus 1622 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 166 | 0.01333 | 349 |
| 855 | 0 | 1652 | |
| GC-skew reverse | 2095 | 0 | 1656 |
| AT-skew forward | 804 | 0 | 1570 |
| AT-skew reverse | 2220 | 0 | 1920 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 166 (349.323 kb) | leading | 0.082 |
| 167 (350.042 kb) | 855 (1652.1685 kb) | leading | 0.179 | |
| 856 (1653.338 kb) | 1498 (3345.129 kb) | lagging | -0.073 | |
| GC-skew reverse | 1499 (0 kb) | 2095 (1656.323 kb) | leading | 0.096 |
| 2096 (1657.352 kb) | 2878 (3345.129 kb) | lagging | -0.168 | |
| AT-skew forward | 1 (0 kb) | 804 (1569.5595 kb) | leading | -0.116 |
| 805 (1571.673 kb) | 1498 (3345.129 kb) | lagging | -0.049 | |
| AT-skew reverse | 1499 (0 kb) | 2220 (1919.672 kb) | NA | 0.059 |
| 2221 (1920.2305 kb) | 2878 (3345.129 kb) | lagging | 0.126 |
More G than C on the leading strand for replication.