Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1796226
Number of genes 1915
Oriloc predictions: Origin 0 kb Terminus 907 kb
Worning et al., 2006: Origin 1794 kb Terminus 909 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 0.058 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.87 kb, 304.04 kb, 1732.93 kb
Consensus predictions: Origin 0 kb Terminus 907 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 755 | NA | 892 |
| GC-skew reverse | 1179 | NA | 924 |
| 1530 | NA | 1322 | |
| 1819 | NA | 1682 | |
| AT-skew forward | 384 | NA | 465 |
| 516 | NA | 605 | |
| 810 | NA | 1123 | |
| AT-skew reverse | 1328 | NA | 1081 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 755 (892.15 kb) | leading | 0.055 |
| 756 (892.5445 kb) | 977 (1796.169 kb) | lagging | -0.192 | |
| GC-skew reverse | 978 (0 kb) | 1179 (924.3445 kb) | leading | 0.2 |
| 1180 (925.295 kb) | 1530 (1321.9825 kb) | lagging | -0.048 | |
| 1531 (1323.393 kb) | 1819 (1682.415 kb) | lagging | -0.068 | |
| 1820 (1683.737 kb) | 1915 (1796.169 kb) | lagging | 0.041 | |
| AT-skew forward | 1 (0 kb) | 384 (465.451 kb) | leading | -0.205 |
| 385 (466.329 kb) | 516 (605.0545 kb) | leading | -0.242 | |
| 517 (606.1805 kb) | 810 (1122.9545 kb) | leading | -0.186 | |
| 811 (1123.3905 kb) | 977 (1796.169 kb) | lagging | -0.115 | |
| AT-skew reverse | 978 (0 kb) | 1328 (1080.6315 kb) | NA | 0.17 |
| 1329 (1081.655 kb) | 1915 (1796.169 kb) | lagging | 0.229 |
More G than C on the leading strand for replication.