Rearranged Oriloc output example: Previous Index Next
Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.
Genome size (bp): 1849742
Number of genes 1973
Oriloc predictions: Origin 372 kb Terminus 927 kb
Worning et al., 2006: Origin 372 kb Terminus 932 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1849.515 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1848.84 kb
Consensus predictions: Origin 372 kb Terminus 927 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 488 | NA | 1002 |
| GC-skew reverse | 1414 | NA | 919 |
| AT-skew forward | 441 | NA | 902 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 488 (1001.9755 kb) | NA | -0.088 |
| 489 (1002.524 kb) | 891 (1849.492 kb) | lagging | -0.123 | |
| GC-skew reverse | 892 (0 kb) | 1414 (919.412 kb) | NA | 0.112 |
| 1415 (920.361 kb) | 1973 (1849.492 kb) | lagging | 0.064 | |
| AT-skew forward | 1 (0 kb) | 441 (902.327 kb) | NA | -0.186 |
| 442 (903.971 kb) | 891 (1849.492 kb) | lagging | 0.067 |