Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Geobacillus.
Genome size (bp): 3544776
Number of genes 3498
Oriloc predictions: Origin 0 kb Terminus 1755 kb
Worning et al., 2006: Origin 0 kb Terminus 1756 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 258.377 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.76 kb, 2215.22 kb, 2744.08 kb
Consensus predictions: Origin 0 kb Terminus 1755 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1332 | 0 | 1766 |
| GC-skew reverse | 2057 | 0 | 1725 |
| AT-skew forward | 155 | 0.03667 | 183 |
| 1333 | 0.02 | 1766 | |
| AT-skew reverse | 2023 | 0 | 1584 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1332 (1765.627 kb) | leading | 0.108 |
| 1333 (1765.8845 kb) | 1668 (3544.385 kb) | lagging | -0.066 | |
| GC-skew reverse | 1669 (0 kb) | 2057 (1725.403 kb) | leading | 0.076 |
| 2058 (1728.061 kb) | 3498 (3544.385 kb) | lagging | -0.095 | |
| AT-skew forward | 1 (0 kb) | 155 (182.9765 kb) | leading | 0.009 |
| 156 (183.729 kb) | 1333 (1765.8845 kb) | leading | -0.068 | |
| 1334 (1771.659 kb) | 1668 (3544.385 kb) | lagging | 0.023 | |
| AT-skew reverse | 1669 (0 kb) | 2023 (1584.3815 kb) | leading | -0.019 |
| 2024 (1587.848 kb) | 3498 (3544.385 kb) | lagging | 0.072 |
More G than C on the leading strand for replication.