Rearranged Oriloc output example: Previous Index Next
Bacteria; Fusobacteria; Fusobacterales; Fusobacteriaceae; Fusobacterium.
Genome size (bp): 2174500
Number of genes 2066
Oriloc predictions: Origin 642 kb Terminus 1509 kb
Worning et al., 2006: Origin 641 kb Terminus 1828 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 511.353 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 640.91 kb
Consensus predictions: Origin 642 kb Terminus 1509 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 166 | 0.01 | 615 |
| 707 | 0.02 | 1509 | |
| GC-skew reverse | 1386 | 0.00333 | 653 |
| 1696 | 0 | 1528 | |
| AT-skew forward | 169 | 0.00333 | 619 |
| 637 | 0.03333 | 1390 | |
| AT-skew reverse | 1377 | 0 | 632 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 166 (614.829 kb) | lagging | 0.154 |
| 167 (616.46 kb) | 707 (1509.051 kb) | leading | 0.337 | |
| 708 (1509.65 kb) | 963 (2174.476 kb) | lagging | 0.188 | |
| GC-skew reverse | 964 (0 kb) | 1386 (652.65 kb) | lagging | -0.341 |
| 1387 (654.7915 kb) | 1696 (1528.16 kb) | leading | -0.174 | |
| 1697 (1528.963 kb) | 2066 (2174.476 kb) | lagging | -0.357 | |
| AT-skew forward | 1 (0 kb) | 169 (619.4575 kb) | lagging | -0.023 |
| 170 (620.9865 kb) | 637 (1389.6505 kb) | leading | 0.075 | |
| 638 (1390.944 kb) | 963 (2174.476 kb) | NA | 0.004 | |
| AT-skew reverse | 964 (0 kb) | 1377 (631.6025 kb) | lagging | -0.109 |
| 1378 (633.0515 kb) | 2066 (2174.476 kb) | NA | -0.022 |