Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.
Genome size (bp): 1892819
Number of genes 1557
Oriloc predictions: Origin 0 kb Terminus 1009 kb
Worning et al., 2006: Origin 0 kb Terminus 1003 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1550.394 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.76 kb
Consensus predictions: Origin 0 kb Terminus 1009 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 561 | NA | 995 |
| GC-skew reverse | 1164 | NA | 992 |
| AT-skew forward | 586 | NA | 1063 |
| AT-skew reverse | 1226 | NA | 1100 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 561 (994.7165 kb) | leading | 0.263 |
| 562 (995.8195 kb) | 860 (1892.386 kb) | lagging | -0.08 | |
| GC-skew reverse | 861 (0 kb) | 1164 (992.3655 kb) | leading | 0.08 |
| 1165 (999.284 kb) | 1557 (1892.386 kb) | lagging | -0.256 | |
| AT-skew forward | 1 (0 kb) | 586 (1063.196 kb) | leading | -0.117 |
| 587 (1072.27 kb) | 860 (1892.386 kb) | lagging | -0.064 | |
| AT-skew reverse | 861 (0 kb) | 1226 (1099.693 kb) | NA | 0.07 |
| 1227 (1101.7905 kb) | 1557 (1892.386 kb) | lagging | 0.118 |
More G than C on the leading strand for replication.