Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Genome size (bp): 4303871
Number of genes 4095
Oriloc predictions: Origin 0 kb Terminus 2110 kb
Worning et al., 2006: Origin 0 kb Terminus 2097 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3562.847 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.86 kb, 2177.89 kb, 2834.86 kb
Consensus predictions: Origin 0 kb Terminus 2110 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 397 | NA | 555 |
| 1496 | NA | 2143 | |
| GC-skew reverse | 2483 | NA | 2112 |
| AT-skew forward | 1234 | NA | 1806 |
| AT-skew reverse | 3267 | NA | 3094 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 397 (554.9855 kb) | leading | 0.055 |
| 398 (555.668 kb) | 1496 (2143.1175 kb) | leading | 0.079 | |
| 1497 (2145.9975 kb) | 1992 (4303.523 kb) | lagging | -0.101 | |
| GC-skew reverse | 1993 (0 kb) | 2483 (2111.7725 kb) | leading | 0.078 |
| 2484 (2112.5385 kb) | 4095 (4303.523 kb) | lagging | -0.071 | |
| AT-skew forward | 1 (0 kb) | 1234 (1806.2185 kb) | leading | -0.024 |
| 1235 (1808.407 kb) | 1992 (4303.523 kb) | NA | -0.03 | |
| AT-skew reverse | 1993 (0 kb) | 3267 (3093.7655 kb) | NA | 0.009 |
| 3268 (3095.159 kb) | 4095 (4303.523 kb) | lagging | 0.035 |