Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.
Genome size (bp): 1512977
Number of genes 958
Oriloc predictions: Origin 0 kb Terminus 720 kb
Worning et al., 2006: Origin 1509 kb Terminus 703 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1240.088 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 487.15 kb
Consensus predictions: Origin 0 kb Terminus 720 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 202 | NA | 688 |
| 239 | NA | 757 | |
| GC-skew reverse | 678 | NA | 718 |
| 839 | NA | 1115 | |
| AT-skew forward | 221 | NA | 713 |
| 339 | NA | 1201 | |
| AT-skew reverse | 674 | NA | 697 |
| 704 | NA | 789 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 202 (687.8325 kb) | leading | 0.528 |
| 203 (688.816 kb) | 239 (757.468 kb) | NA | 0.175 | |
| 240 (759.3595 kb) | 457 (1512.959 kb) | lagging | -0.123 | |
| GC-skew reverse | 458 (0 kb) | 678 (717.828 kb) | leading | 0.149 |
| 679 (721.748 kb) | 839 (1114.9655 kb) | lagging | -0.591 | |
| 840 (1116.985 kb) | 958 (1512.959 kb) | lagging | -0.511 | |
| AT-skew forward | 1 (0 kb) | 221 (713.3755 kb) | leading | -0.165 |
| 222 (717.7535 kb) | 339 (1200.762 kb) | lagging | 0.092 | |
| 340 (1210.731 kb) | 457 (1512.959 kb) | lagging | 0.036 | |
| AT-skew reverse | 458 (0 kb) | 674 (697.0685 kb) | leading | -0.078 |
| 675 (698.751 kb) | 704 (789.4945 kb) | lagging | 0.086 | |
| 705 (791.279 kb) | 958 (1512.959 kb) | lagging | 0.184 |
More G than C on the leading strand for replication.