Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.
Genome size (bp): 1332022
Number of genes 1172
Oriloc predictions: Origin 0 kb Terminus 701 kb
Worning et al., 2006: Origin 0 kb Terminus 659 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 696.583 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 701 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 317 | NA | 649 |
| GC-skew reverse | 831 | NA | 692 |
| AT-skew forward | 252 | NA | 533 |
| AT-skew reverse | 965 | NA | 900 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 317 (649.016 kb) | leading | 0.213 |
| 318 (649.878 kb) | 554 (1332.014 kb) | lagging | -0.15 | |
| GC-skew reverse | 555 (0 kb) | 831 (692.004 kb) | leading | 0.155 |
| 832 (695.4375 kb) | 1172 (1332.014 kb) | lagging | -0.203 | |
| AT-skew forward | 1 (0 kb) | 252 (532.857 kb) | leading | -0.093 |
| 253 (533.5695 kb) | 554 (1332.014 kb) | NA | -0.033 | |
| AT-skew reverse | 555 (0 kb) | 965 (899.825 kb) | NA | 0.077 |
| 966 (903.474 kb) | 1172 (1332.014 kb) | lagging | 0.136 |