Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1897573
Number of genes 1894
Oriloc predictions: Origin 0 kb Terminus 888 kb
Worning et al., 2006: Origin 1877 kb Terminus 904 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1791.627 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 888 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 699 | NA | 883 |
| GC-skew reverse | 1106 | NA | 885 |
| 1453 | NA | 1274 | |
| 1492 | NA | 1315 | |
| AT-skew forward | 287 | NA | 367 |
| 436 | NA | 574 | |
| 888 | NA | 1785 | |
| AT-skew reverse | 1165 | NA | 966 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 699 (882.964 kb) | leading | 0.058 |
| 700 (883.7255 kb) | 943 (1897.539 kb) | lagging | -0.2 | |
| GC-skew reverse | 944 (0 kb) | 1106 (884.9515 kb) | leading | 0.179 |
| 1107 (889.5645 kb) | 1453 (1274.237 kb) | lagging | -0.091 | |
| 1454 (1275.5175 kb) | 1492 (1315.4435 kb) | lagging | -0.35 | |
| 1493 (1318.2135 kb) | 1894 (1897.539 kb) | lagging | -0.039 | |
| AT-skew forward | 1 (0 kb) | 287 (367.454 kb) | leading | -0.131 |
| 288 (368.17 kb) | 436 (574.4455 kb) | leading | -0.15 | |
| 437 (574.9485 kb) | 888 (1785.3275 kb) | NA | -0.132 | |
| 889 (1789.542 kb) | 943 (1897.539 kb) | lagging | -0.026 | |
| AT-skew reverse | 944 (0 kb) | 1165 (965.516 kb) | NA | 0.141 |
| 1166 (966.0905 kb) | 1894 (1897.539 kb) | lagging | 0.09 |