Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Ehrlichia.
Genome size (bp): 1315030
Number of genes 925
Oriloc predictions: Origin 9 kb Terminus 654 kb
Worning et al., 2006: Origin 11 kb Terminus 655 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 769.927 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 291.26 kb, 414.2 kb
Consensus predictions: Origin 9 kb Terminus 654 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 233 | 0 | 653 |
| GC-skew reverse | 629 | 0 | 660 |
| AT-skew forward | 236 | 0 | 663 |
| 381 | 0.00667 | 1239 | |
| 412 | 0.00222 | 1291 | |
| AT-skew reverse | 631 | 0 | 664 |
| 805 | 0.01333 | 1018 | |
| 837 | 0.00444 | 1052 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 233 (652.6085 kb) | leading | 0.542 |
| 234 (654.0135 kb) | 427 (1314.671 kb) | lagging | -0.22 | |
| GC-skew reverse | 428 (0 kb) | 629 (659.7175 kb) | leading | 0.22 |
| 630 (662.2105 kb) | 925 (1314.671 kb) | lagging | -0.56 | |
| AT-skew forward | 1 (0 kb) | 236 (662.9015 kb) | leading | -0.164 |
| 237 (667.8425 kb) | 381 (1238.531 kb) | lagging | 0.133 | |
| 382 (1245.5865 kb) | 412 (1290.544 kb) | lagging | -0.077 | |
| 413 (1293.292 kb) | 427 (1314.671 kb) | lagging | 0.173 | |
| AT-skew reverse | 428 (0 kb) | 631 (663.835 kb) | leading | -0.122 |
| 632 (664.7825 kb) | 805 (1017.829 kb) | lagging | 0.173 | |
| 806 (1019.4905 kb) | 837 (1051.9545 kb) | lagging | -0.02 | |
| 838 (1053.402 kb) | 925 (1314.671 kb) | lagging | 0.198 |
More G than C on the leading strand for replication.