Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Genome size (bp): 3694126
Number of genes 3334
Oriloc predictions: Origin 84 kb Terminus 2010 kb
Worning et al., 2006: Origin 2 kb Terminus 1786 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 31.445 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.86 kb
Consensus predictions: Origin 0 kb Terminus 2010 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1079 | 0 | 2054 |
| GC-skew reverse | 1765 | 0 | 72 |
| 2454 | 0 | 2014 | |
| AT-skew forward | 1082 | 0 | 2058 |
| AT-skew reverse | 2354 | 0 | 1718 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1079 (2054.0745 kb) | leading | 0.01 |
| 1080 (2054.7685 kb) | 1731 (3693.781 kb) | lagging | -0.097 | |
| GC-skew reverse | 1732 (0 kb) | 1765 (72.126 kb) | leading | -0.014 |
| 1766 (73.415 kb) | 2454 (2014.0375 kb) | leading | 0.1 | |
| 2455 (2015.7355 kb) | 3334 (3693.781 kb) | lagging | -0.002 | |
| AT-skew forward | 1 (0 kb) | 1082 (2057.5185 kb) | leading | -0.199 |
| 1083 (2062.124 kb) | 1731 (3693.781 kb) | lagging | 0.023 | |
| AT-skew reverse | 1732 (0 kb) | 2354 (1717.7815 kb) | leading | 0.005 |
| 2355 (1719.701 kb) | 3334 (3693.781 kb) | lagging | 0.176 |
More G than C on the leading strand for replication.