Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Genome size (bp): 3587082
Number of genes 3174
Oriloc predictions: Origin 0 kb Terminus 1775 kb
Worning et al., 2006: Origin 2 kb Terminus 667 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 869.516 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 1775 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 874 | 0 | 1835 |
| GC-skew reverse | 2289 | 0 | 1791 |
| AT-skew forward | 886 | 0 | 1862 |
| AT-skew reverse | 2212 | 0 | 1584 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 874 (1835.114 kb) | leading | 0.017 |
| 875 (1838.037 kb) | 1582 (3587.014 kb) | lagging | -0.076 | |
| GC-skew reverse | 1583 (0 kb) | 2289 (1790.561 kb) | leading | 0.097 |
| 2290 (1793.215 kb) | 3174 (3587.014 kb) | lagging | -0.025 | |
| AT-skew forward | 1 (0 kb) | 886 (1862.364 kb) | leading | -0.2 |
| 887 (1863.0115 kb) | 1582 (3587.014 kb) | lagging | -0.029 | |
| AT-skew reverse | 1583 (0 kb) | 2212 (1584.3295 kb) | leading | 0.027 |
| 2213 (1587.152 kb) | 3174 (3587.014 kb) | lagging | 0.188 |
More G than C on the leading strand for replication.