Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.
Genome size (bp): 1156948
Number of genes 1034
Oriloc predictions: Origin 0 kb Terminus 695 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1156.872 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 695 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 337 | NA | 697 |
| GC-skew reverse | 787 | NA | 688 |
| AT-skew forward | 317 | NA | 659 |
| AT-skew reverse | 766 | NA | 637 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 337 (696.788 kb) | leading | 0.006 |
| 338 (697.8015 kb) | 501 (1156.731 kb) | lagging | -0.117 | |
| GC-skew reverse | 502 (0 kb) | 787 (688.214 kb) | leading | 0.142 |
| 788 (689.425 kb) | 1034 (1156.731 kb) | lagging | -0.021 | |
| AT-skew forward | 1 (0 kb) | 317 (659.335 kb) | leading | -0.341 |
| 318 (661.39 kb) | 501 (1156.731 kb) | lagging | -0.201 | |
| AT-skew reverse | 502 (0 kb) | 766 (636.9795 kb) | leading | 0.181 |
| 767 (639.8225 kb) | 1034 (1156.731 kb) | lagging | 0.317 |
More G than C on the leading strand for replication.