Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
Genome size (bp): 1471779
Number of genes 1312
Oriloc predictions: Origin 16 kb Terminus 691 kb
Worning et al., 2006: Origin 1440 kb Terminus 704 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 903.896 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 0 kb Terminus 691 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 371 | NA | 659 |
| GC-skew reverse | 891 | NA | 691 |
| AT-skew forward | 391 | NA | 710 |
| AT-skew reverse | 900 | NA | 709 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 371 (659.453 kb) | leading | 0.031 |
| 372 (660.2655 kb) | 642 (1471.524 kb) | lagging | -0.052 | |
| GC-skew reverse | 643 (0 kb) | 891 (691.4125 kb) | leading | 0.09 |
| 892 (692.5065 kb) | 1312 (1471.524 kb) | lagging | 0.006 | |
| AT-skew forward | 1 (0 kb) | 391 (710.39 kb) | leading | -0.187 |
| 392 (711.468 kb) | 642 (1471.524 kb) | lagging | -0.09 | |
| AT-skew reverse | 643 (0 kb) | 900 (709.004 kb) | leading | 0.087 |
| 901 (709.318 kb) | 1312 (1471.524 kb) | lagging | 0.191 |
More G than C on the leading strand for replication.