Rearranged Oriloc output example: Previous Index Next
Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.
Genome size (bp): 2575032
Number of genes 2273
Oriloc predictions: Origin 1820 kb Terminus 0 kb
Worning et al., 2006: Origin 1835 kb Terminus 55 kb
Position(s) of the ORC/Cdc6 gene(s): NA
Consensus predictions: Origin 1820 kb Terminus 0 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 929 | 0.00667 | 2057 |
| GC-skew reverse | 1969 | 0.01333 | 1850 |
| AT-skew forward | 443 | 0.00933 | 957 |
| 528 | 0.00267 | 1147 | |
| 577 | 0 | 1250 | |
| 679 | 0.03067 | 1524 | |
| 821 | 0.00267 | 1848 | |
| AT-skew reverse | 1665 | 0.02 | 1272 |
| 1965 | 0 | 1828 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 929 (2056.7765 kb) | lagging | 0.014 |
| 930 (2059.6705 kb) | 1168 (2574.796 kb) | leading | 0.071 | |
| GC-skew reverse | 1169 (0 kb) | 1969 (1849.5445 kb) | lagging | -0.027 |
| 1970 (1850.5905 kb) | 2273 (2574.796 kb) | leading | 0.053 | |
| AT-skew forward | 1 (0 kb) | 443 (957.2505 kb) | lagging | -0.08 |
| 444 (961.6575 kb) | 528 (1147.4695 kb) | lagging | 0.062 | |
| 529 (1149.0865 kb) | 577 (1250.4995 kb) | lagging | -0.154 | |
| 578 (1251.43 kb) | 679 (1523.6625 kb) | lagging | 0.125 | |
| 680 (1526.353 kb) | 821 (1847.54 kb) | lagging | 0.005 | |
| 822 (1852.2635 kb) | 1168 (2574.796 kb) | leading | -0.202 | |
| AT-skew reverse | 1169 (0 kb) | 1665 (1272.164 kb) | lagging | 0.065 |
| 1666 (1273.2755 kb) | 1965 (1828.394 kb) | lagging | 0.182 | |
| 1966 (1838.198 kb) | 2273 (2574.796 kb) | leading | -0.078 |
More G than C on the leading strand for replication.