Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Genome size (bp): 2788459
Number of genes 2472
Oriloc predictions: Origin 2453 kb Terminus 1180 kb
Worning et al., 2006: Origin 2459 kb Terminus 1094 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 552.795 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): NA
Consensus predictions: Origin 2453 kb Terminus 1180 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 537 | NA | 1119 |
| 1072 | NA | 2487 | |
| GC-skew reverse | 1663 | NA | 1131 |
| 2292 | NA | 2368 | |
| AT-skew forward | 538 | NA | 1123 |
| 1048 | NA | 2438 | |
| AT-skew reverse | 1667 | NA | 1135 |
| 2345 | NA | 2470 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 537 (1119.4725 kb) | leading | 0.016 |
| 538 (1123.2275 kb) | 1072 (2486.767 kb) | lagging | -0.065 | |
| 1073 (2491.099 kb) | 1234 (2788.442 kb) | leading | 0.013 | |
| GC-skew reverse | 1235 (0 kb) | 1663 (1131.421 kb) | leading | 0.087 |
| 1664 (1132.2995 kb) | 2292 (2368.0175 kb) | lagging | -0.012 | |
| 2293 (2369.55 kb) | 2472 (2788.442 kb) | NA | 0.06 | |
| AT-skew forward | 1 (0 kb) | 538 (1123.2275 kb) | leading | -0.2 |
| 539 (1124.561 kb) | 1048 (2437.8655 kb) | lagging | -0.047 | |
| 1049 (2439.6285 kb) | 1234 (2788.442 kb) | leading | -0.203 | |
| AT-skew reverse | 1235 (0 kb) | 1667 (1135.3685 kb) | leading | 0.035 |
| 1668 (1136.515 kb) | 2345 (2470.411 kb) | lagging | 0.185 | |
| 2346 (2473.4115 kb) | 2472 (2788.442 kb) | leading | 0.04 |
More G than C on the leading strand for replication.