Oriloc output examples
Click on the links below to get an example of Oriloc output on complete
bacterial chromosomes. Click
there
to get more explanations about these graphs.
Last update: Mon May 1 22:50:45 2006
n = 357 chromosomes
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Acinetobacter
Acinetobacter sp ADP1 NC_005966 3,598,621 bp 17-JAN-2006
Aeropyrum
Aeropyrum pernix NC_000854 1,669,695 bp 03-DEC-2005
Agrobacterium
Agrobacterium tumefaciens C58 Cereon NC_003062 2,841,581 bp 02-DEC-2005
............. ........... ... ...... NC_003063 2,074,782 bp 03-APR-2006
............. ........... C58 UWash NC_003304 2,841,490 bp 03-APR-2006
............. ........... ... ..... NC_003305 2,075,560 bp 03-APR-2006
Anabaena
Anabaena variabilis ATCC 29413 NC_007413 6,365,727 bp 04-APR-2006
Anaeromyxobacter
Anaeromyxobacter dehalogenans 2CP-C NC_007760 5,013,479 bp 31-MAR-2006
Anaplasma
Anaplasma marginale St Maries NC_004842 1,197,687 bp 02-DEC-2005
......... phagocytophilum HZ NC_007797 1,471,282 bp 30-MAR-2006
Aquifex
Aquifex aeolicus NC_000918 1,551,335 bp 02-DEC-2005
Archaeoglobus
Archaeoglobus fulgidus NC_000917 2,178,400 bp 17-JAN-2006
Aster
Aster yellows witches-broom phytoplasma AYWB NC_007716 706,569 bp 30-MAR-2006
Azoarcus
Azoarcus sp EbN1 NC_006513 4,296,230 bp 17-JAN-2006
Bacillus
Bacillus anthracis Ames NC_003997 5,227,293 bp 02-DEC-2005
........ ......... Ames 0581 NC_007530 5,227,419 bp 03-APR-2006
........ ......... str Sterne NC_005945 5,228,663 bp 03-APR-2006
........ cereus ATCC14579 NC_004722 5,411,809 bp 02-DEC-2005
........ ...... ATCC 10987 NC_003909 5,224,283 bp 17-JAN-2006
........ ...... ZK NC_006274 5,300,915 bp 03-DEC-2005
........ clausii KSM-K16 NC_006582 4,303,871 bp 02-DEC-2005
........ halodurans NC_002570 4,202,352 bp 03-DEC-2005
........ licheniformis ATCC 14580 NC_006270 4,222,334 bp 18-JAN-2006
........ ............. DSM 13 NC_006322 4,222,645 bp 03-DEC-2005
........ subtilis NC_000964 4,214,630 bp 02-DEC-2005
........ thuringiensis konkukian NC_005957 5,237,682 bp 03-APR-2006
Bacteroides
Bacteroides fragilis NCTC 9434 NC_003228 5,205,140 bp 03-DEC-2005
........... ........ YCH46 NC_006347 5,277,274 bp 03-DEC-2005
........... thetaiotaomicron VPI-5482 NC_004663 6,260,361 bp 17-JAN-2006
Bartonella
Bartonella henselae Houston-1 NC_005956 1,931,047 bp 03-DEC-2005
.......... quintana Toulouse NC_005955 1,581,384 bp 03-DEC-2005
Bdellovibrio
Bdellovibrio bacteriovorus NC_005363 3,782,950 bp 03-DEC-2005
Bifidobacterium
Bifidobacterium longum NC_004307 2,256,640 bp 17-JAN-2006
Bordetella
Bordetella bronchiseptica NC_002927 5,339,179 bp 18-JAN-2006
.......... parapertussis NC_002928 4,773,551 bp 18-JAN-2006
.......... pertussis NC_002929 4,086,189 bp 18-JAN-2006
Borrelia
Borrelia burgdorferi NC_001318 910,724 bp 02-DEC-2005
........ garinii PBi NC_006156 904,246 bp 03-APR-2006
Bradyrhizobium
Bradyrhizobium japonicum NC_004463 9,105,828 bp 24-MAR-2006
Brucella
Brucella abortus 9-941 NC_006932 2,124,241 bp 18-JAN-2006
........ ....... ..... NC_006933 1,162,204 bp 18-JAN-2006
........ melitensis NC_003317 2,117,144 bp 02-DEC-2005
........ .......... NC_003318 1,177,787 bp 17-JAN-2006
........ .......... biovar Abortus NC_007618 2,121,359 bp 18-JAN-2006
........ .......... ...... ....... NC_007624 1,156,948 bp 18-JAN-2006
........ suis 1330 NC_004310 2,107,794 bp 02-DEC-2005
........ .... .... NC_004311 1,207,381 bp 02-DEC-2005
Buchnera
Buchnera aphidicola NC_004545 615,980 bp 02-DEC-2005
........ .......... Sg NC_004061 641,454 bp 03-APR-2006
........ sp NC_002528 640,681 bp 09-JAN-2006
Burkholderia
Burkholderia 383 NC_007509 1,395,069 bp 03-APR-2006
............ ... NC_007510 3,694,126 bp 18-JAN-2006
............ ... NC_007511 3,587,082 bp 03-APR-2006
............ mallei ATCC 23344 NC_006348 3,510,148 bp 18-JAN-2006
............ ...... .... ..... NC_006349 2,325,379 bp 18-JAN-2006
............ pseudomallei 1710b NC_007434 4,126,292 bp 03-APR-2006
............ ............ ..... NC_007435 3,181,762 bp 03-APR-2006
............ ............ K96243 NC_006350 4,074,542 bp 03-DEC-2005
............ ............ ...... NC_006351 3,173,005 bp 17-FEB-2006
............ thailandensis E264 NC_007650 2,914,771 bp 18-JAN-2006
............ ............. .... NC_007651 3,809,201 bp 18-JAN-2006
............ xenovorans LB400 NC_007951 4,895,836 bp 13-APR-2006
............ .......... ..... NC_007952 3,363,523 bp 13-APR-2006
............ .......... ..... NC_007953 1,471,779 bp 13-APR-2006
Campylobacter
Campylobacter jejuni NC_002163 1,641,481 bp 17-JAN-2006
............. ...... RM1221 NC_003912 1,777,831 bp 02-DEC-2005
Candidatus
Candidatus Blochmannia floridanus NC_005061 705,557 bp 03-APR-2006
.......... ........... pennsylvanicus BPEN NC_007292 791,654 bp 03-DEC-2005
.......... Pelagibacter ubique HTCC1062 NC_007205 1,308,759 bp 25-JAN-2006
Carboxydothermus
Carboxydothermus hydrogenoformans Z-2901 NC_007503 2,401,520 bp 30-MAR-2006
Caulobacter
Caulobacter crescentus NC_002696 4,016,947 bp 20-JAN-2006
Chlamydia
Chlamydia muridarum NC_002620 1,072,950 bp 09-JAN-2006
......... trachomatis NC_000117 1,042,519 bp 18-JAN-2006
......... ........... A HAR-13 NC_007429 1,044,459 bp 30-MAR-2006
Chlamydophila
Chlamydophila abortus S26 3 NC_004552 1,144,377 bp 02-DEC-2005
............. caviae NC_003361 1,173,390 bp 02-DEC-2005
............. felis Fe C-56 NC_007899 1,166,239 bp 16-MAR-2006
............. pneumoniae AR39 NC_002179 1,229,853 bp 06-JAN-2006
............. .......... CWL029 NC_000922 1,230,230 bp 17-JAN-2006
............. .......... J138 NC_002491 1,226,565 bp 17-JAN-2006
............. .......... TW 183 NC_005043 1,225,935 bp 17-JAN-2006
Chlorobium
Chlorobium chlorochromatii CaD3 NC_007514 2,572,079 bp 30-MAR-2006
.......... tepidum TLS NC_002932 2,154,946 bp 02-DEC-2005
Chromobacterium
Chromobacterium violaceum NC_005085 4,751,080 bp 03-APR-2006
Chromohalobacter
Chromohalobacter salexigens DSM 3043 NC_007963 3,696,649 bp 17-APR-2006
Clostridium
Clostridium acetobutylicum NC_003030 3,940,880 bp 18-JAN-2006
........... perfringens NC_003366 3,031,430 bp 17-JAN-2006
........... tetani E88 NC_004557 2,799,251 bp 03-APR-2006
Colwellia
Colwellia psychrerythraea 34H NC_003910 5,373,180 bp 17-JAN-2006
Corynebacterium
Corynebacterium diphtheriae NC_002935 2,488,635 bp 03-DEC-2005
............... efficiens YS-314 NC_004369 3,147,090 bp 02-DEC-2005
............... glutamicum ATCC 13032 Bielefeld NC_006958 3,282,708 bp 17-JAN-2006
............... .......... ATCC 13032 Kitasato NC_003450 3,309,401 bp 06-JAN-2006
............... jeikeium K411 NC_007164 2,462,499 bp 30-MAR-2006
Coxiella
Coxiella burnetii NC_002971 1,995,281 bp 17-JAN-2006
Cyanobacteria
Cyanobacteria bacterium Yellowstone A-Prime NC_007775 2,932,766 bp 30-MAR-2006
............. ......... Yellowstone B-Prime NC_007776 3,046,682 bp 30-MAR-2006
Dechloromonas
Dechloromonas aromatica RCB NC_007298 4,501,104 bp 04-APR-2006
Dehalococcoides
Dehalococcoides CBDB1 NC_007356 1,395,502 bp 03-DEC-2005
............... ethenogenes 195 NC_002936 1,469,720 bp 03-APR-2006
Deinococcus
Deinococcus radiodurans NC_001263 2,648,638 bp 03-DEC-2005
........... ........... NC_001264 412,348 bp 03-DEC-2005
Desulfitobacterium
Desulfitobacterium hafniense Y51 NC_007907 5,727,534 bp 03-APR-2006
Desulfotalea
Desulfotalea psychrophila LSv54 NC_006138 3,523,383 bp 02-DEC-2005
Desulfovibrio
Desulfovibrio desulfuricans G20 NC_007519 3,730,232 bp 04-APR-2006
............. vulgaris Hildenborough NC_002937 3,570,858 bp 17-JAN-2006
Ehrlichia
Ehrlichia canis Jake NC_007354 1,315,030 bp 03-APR-2006
......... chaffeensis Arkansas NC_007799 1,176,248 bp 30-MAR-2006
......... ruminantium Gardel NC_006831 1,499,920 bp 03-DEC-2005
......... ........... Welgevonden NC_005295 1,516,355 bp 03-DEC-2005
......... ........... str. Welgevonden NC_006832 1,512,977 bp 03-APR-2006
Enterococcus
Enterococcus faecalis V583 NC_004668 3,218,031 bp 02-DEC-2005
Erwinia
Erwinia carotovora atroseptica SCRI1043 NC_004547 5,064,019 bp 02-DEC-2005
Erythrobacter
Erythrobacter litoralis HTCC2594 NC_007722 3,052,398 bp 30-MAR-2006
Escherichia
Escherichia coli CFT073 NC_004431 5,231,428 bp 04-APR-2006
........... .... K12 NC_000913 4,639,675 bp 21-MAR-2006
........... .... O157H7 NC_002695 5,498,450 bp 03-APR-2006
........... .... O157H7 EDL933 NC_002655 5,528,445 bp 02-DEC-2005
........... .... UTI89 NC_007946 5,065,741 bp 18-APR-2006
........... .... W3110 AC_000091 4,646,332 bp 12-APR-2006
Francisella
Francisella tularensis holarctica NC_007880 1,895,994 bp 30-MAR-2006
........... .......... tularensis NC_006570 1,892,819 bp 17-JAN-2006
Frankia
Frankia CcI3 NC_007777 5,433,628 bp 30-MAR-2006
Fusobacterium
Fusobacterium nucleatum NC_003454 2,174,500 bp 02-DEC-2005
Geobacillus
Geobacillus kaustophilus HTA426 NC_006510 3,544,776 bp 18-JAN-2006
Geobacter
Geobacter metallireducens GS-15 NC_007517 3,997,420 bp 13-APR-2006
......... sulfurreducens NC_002939 3,814,139 bp 18-JAN-2006
Gloeobacter
Gloeobacter violaceus NC_005125 4,659,019 bp 03-DEC-2005
Gluconobacter
Gluconobacter oxydans 621H NC_006677 2,702,173 bp 03-DEC-2005
Haemophilus
Haemophilus ducreyi 35000HP NC_002940 1,698,955 bp 03-APR-2006
........... influenzae NC_000907 1,830,138 bp 13-DEC-2005
........... .......... 86 028NP NC_007146 1,913,428 bp 18-JAN-2006
Hahella
Hahella chejuensis KCTC 2396 NC_007645 7,215,267 bp 30-MAR-2006
Haloarcula
Haloarcula marismortui ATCC 43049 NC_006396 3,131,724 bp 18-JAN-2006
.......... ........... .... ..... NC_006397 288,050 bp 30-MAR-2006
Halobacterium
Halobacterium sp NC_002607 2,014,239 bp 02-DEC-2005
Helicobacter
Helicobacter hepaticus NC_004917 1,799,146 bp 02-DEC-2005
............ pylori 26695 NC_000915 1,667,867 bp 17-JAN-2006
............ ...... J99 NC_000921 1,643,831 bp 02-DEC-2005
Idiomarina
Idiomarina loihiensis L2TR NC_006512 2,839,318 bp 03-DEC-2005
Jannaschia
Jannaschia CCS1 NC_007802 4,317,977 bp 30-MAR-2006
Lactobacillus
Lactobacillus acidophilus NCFM NC_006814 1,993,564 bp 03-DEC-2005
............. johnsonii NCC 533 NC_005362 1,992,676 bp 06-FEB-2006
............. plantarum NC_004567 3,308,274 bp 09-JAN-2006
............. sakei 23K NC_007576 1,884,661 bp 03-MAR-2006
............. salivarius UCC118 NC_007929 1,827,111 bp 01-APR-2006
Lactococcus
Lactococcus lactis NC_002662 2,365,589 bp 18-JAN-2006
Legionella
Legionella pneumophila Lens NC_006369 3,345,687 bp 03-DEC-2005
.......... ........... Paris NC_006368 3,503,610 bp 03-DEC-2005
.......... ........... Philadelphia 1 NC_002942 3,397,754 bp 03-APR-2006
Leifsonia
Leifsonia xyli xyli CTCB0 NC_006087 2,584,158 bp 03-APR-2006
Leptospira
Leptospira interrogans serovar Copenhageni NC_005823 4,277,185 bp 03-APR-2006
.......... ........... ....... ........... NC_005824 350,181 bp 03-APR-2006
.......... ........... serovar Lai NC_004342 4,332,241 bp 03-APR-2006
.......... ........... ....... ... NC_004343 358,943 bp 03-APR-2006
Listeria
Listeria innocua NC_003212 3,011,208 bp 03-DEC-2005
........ monocytogenes NC_003210 2,944,528 bp 02-DEC-2005
........ ............. 4b F2365 NC_002973 2,905,187 bp 24-JAN-2006
Magnetospirillum
Magnetospirillum magneticum AMB-1 NC_007626 4,967,148 bp 03-APR-2006
Mannheimia
Mannheimia succiniciproducens MBEL55E NC_006300 2,314,078 bp 02-DEC-2005
Mesoplasma
Mesoplasma florum L1 NC_006055 793,224 bp 03-DEC-2005
Mesorhizobium
Mesorhizobium loti NC_002678 7,036,071 bp 03-DEC-2005
Methanobacterium
Methanobacterium thermoautotrophicum NC_000916 1,751,377 bp 02-DEC-2005
Methanococcoides
Methanococcoides burtonii DSM 6242 NC_007955 2,575,032 bp 13-APR-2006
Methanococcus
Methanococcus jannaschii NC_000909 1,664,970 bp 03-DEC-2005
............. maripaludis S2 NC_005791 1,661,137 bp 18-JAN-2006
Methanopyrus
Methanopyrus kandleri NC_003551 1,694,969 bp 02-DEC-2005
Methanosarcina
Methanosarcina acetivorans NC_003552 5,751,492 bp 17-JAN-2006
.............. barkeri fusaro NC_007355 4,837,408 bp 23-JAN-2006
.............. mazei NC_003901 4,096,345 bp 23-JAN-2006
Methanosphaera
Methanosphaera stadtmanae NC_007681 1,767,403 bp 30-MAR-2006
Methanospirillum
Methanospirillum hungatei JF-1 NC_007796 3,544,738 bp 30-MAR-2006
Methylobacillus
Methylobacillus flagellatus KT NC_007947 2,971,517 bp 13-APR-2006
Methylococcus
Methylococcus capsulatus Bath NC_002977 3,304,561 bp 03-APR-2006
Moorella
Moorella thermoacetica ATCC 39073 NC_007644 2,628,784 bp 04-APR-2006
Mycobacterium
Mycobacterium avium paratuberculosis NC_002944 4,829,781 bp 18-JAN-2006
............. bovis NC_002945 4,345,492 bp 18-JAN-2006
............. leprae NC_002677 3,268,203 bp 03-DEC-2005
............. tuberculosis CDC1551 NC_002755 4,403,837 bp 17-JAN-2006
............. ............ H37Rv NC_000962 4,411,532 bp 17-JAN-2006
Mycoplasma
Mycoplasma capricolum ATCC 27343 NC_007633 1,010,023 bp 30-MAR-2006
.......... gallisepticum NC_004829 996,422 bp 02-DEC-2005
.......... genitalium NC_000908 580,074 bp 18-JAN-2006
.......... hyopneumoniae 232 NC_006360 892,758 bp 09-JAN-2006
.......... ............. 7448 NC_007332 920,079 bp 03-DEC-2005
.......... ............. J NC_007295 897,405 bp 03-DEC-2005
.......... mobile 163K NC_006908 777,079 bp 03-APR-2006
.......... mycoides NC_005364 1,211,703 bp 03-APR-2006
.......... penetrans NC_004432 1,358,633 bp 03-APR-2006
.......... pneumoniae NC_000912 816,394 bp 18-JAN-2006
.......... pulmonis NC_002771 963,879 bp 18-JAN-2006
.......... synoviae 53 NC_007294 799,476 bp 30-MAR-2006
Nanoarchaeum
Nanoarchaeum equitans NC_005213 490,885 bp 02-DEC-2005
Natronomonas
Natronomonas pharaonis NC_007426 2,595,221 bp 18-JAN-2006
Neisseria
Neisseria gonorrhoeae FA 1090 NC_002946 2,153,922 bp 18-JAN-2006
......... meningitidis MC58 NC_003112 2,272,360 bp 17-JAN-2006
......... ............ Z2491 NC_003116 2,184,406 bp 17-JAN-2006
Neorickettsia
Neorickettsia sennetsu Miyayama NC_007798 859,006 bp 30-MAR-2006
Nitrobacter
Nitrobacter hamburgensis X14 NC_007964 4,406,967 bp 17-APR-2006
........... winogradskyi Nb-255 NC_007406 3,402,093 bp 31-MAR-2006
Nitrosococcus
Nitrosococcus oceani ATCC 19707 NC_007484 3,481,691 bp 31-MAR-2006
Nitrosomonas
Nitrosomonas europaea NC_004757 2,812,094 bp 03-APR-2006
Nitrosospira
Nitrosospira multiformis ATCC 25196 NC_007614 3,184,243 bp 31-MAR-2006
Nocardia
Nocardia farcinica IFM10152 NC_006361 6,021,225 bp 03-DEC-2005
Nostoc
Nostoc sp NC_003272 6,413,771 bp 09-JAN-2006
Novosphingobium
Novosphingobium aromaticivorans DSM 12444 NC_007794 3,561,584 bp 30-MAR-2006
Oceanobacillus
Oceanobacillus iheyensis NC_004193 3,630,528 bp 02-DEC-2005
Onion
Onion yellows phytoplasma NC_005303 860,631 bp 03-DEC-2005
Parachlamydia
Parachlamydia sp UWE25 NC_005861 2,414,465 bp 19-DEC-2005
Pasteurella
Pasteurella multocida NC_002663 2,257,487 bp 03-DEC-2005
Pelobacter
Pelobacter carbinolicus NC_007498 3,665,893 bp 01-APR-2006
Pelodictyon
Pelodictyon luteolum DSM 273 NC_007512 2,364,842 bp 31-MAR-2006
Photobacterium
Photobacterium profundum SS9 NC_006370 4,085,304 bp 18-JAN-2006
.............. ......... ... NC_006371 2,237,943 bp 03-APR-2006
Photorhabdus
Photorhabdus luminescens NC_005126 5,688,987 bp 03-DEC-2005
Picrophilus
Picrophilus torridus DSM 9790 NC_005877 1,545,895 bp 03-DEC-2005
Pirellula
Pirellula sp NC_005027 7,145,576 bp 18-JAN-2006
Polaromonas
Polaromonas JS666 NC_007948 5,200,264 bp 13-APR-2006
Porphyromonas
Porphyromonas gingivalis W83 NC_002950 2,343,476 bp 18-JAN-2006
Prochlorococcus
Prochlorococcus marinus CCMP1375 NC_005042 1,751,080 bp 02-DEC-2005
............... ....... MED4 NC_005072 1,657,990 bp 17-JAN-2006
............... ....... MIT9313 NC_005071 2,410,873 bp 17-JAN-2006
............... ....... MIT 9312 NC_007577 1,709,204 bp 30-MAR-2006
............... ....... NATL2A NC_007335 1,842,899 bp 30-MAR-2006
Propionibacterium
Propionibacterium acnes KPA171202 NC_006085 2,560,265 bp 03-APR-2006
Pseudoalteromonas
Pseudoalteromonas haloplanktis TAC125 NC_007481 3,214,944 bp 20-JAN-2006
................. ............ ...... NC_007482 635,328 bp 18-JAN-2006
Pseudomonas
Pseudomonas aeruginosa NC_002516 6,264,403 bp 09-JAN-2006
........... fluorescens Pf-5 NC_004129 7,074,893 bp 03-APR-2006
........... ........... PfO-1 NC_007492 6,438,405 bp 04-APR-2006
........... putida KT2440 NC_002947 6,181,863 bp 17-JAN-2006
........... syringae NC_004578 6,397,126 bp 13-APR-2006
........... ........ phaseolicola 1448A NC_005773 5,928,787 bp 18-JAN-2006
........... ........ pv B728a NC_007005 6,093,698 bp 17-JAN-2006
Psychrobacter
Psychrobacter arcticum 273-4 NC_007204 2,650,701 bp 18-JAN-2006
Pyrobaculum
Pyrobaculum aerophilum NC_003364 2,222,430 bp 02-DEC-2005
Pyrococcus
Pyrococcus abyssi NC_000868 1,765,118 bp 13-DEC-2005
.......... furiosus NC_003413 1,908,256 bp 02-DEC-2005
.......... horikoshii NC_000961 1,738,505 bp 02-DEC-2005
Ralstonia
Ralstonia eutropha JMP134 NC_007347 3,806,533 bp 03-APR-2006
......... ........ ...... NC_007348 2,726,152 bp 30-MAR-2006
......... solanacearum NC_003295 3,716,413 bp 18-JAN-2006
Rhizobium
Rhizobium etli CFN 42 NC_007761 4,381,608 bp 10-MAR-2006
Rhodobacter
Rhodobacter sphaeroides 2 4 1 NC_007493 3,188,609 bp 03-APR-2006
........... ........... . . . NC_007494 943,016 bp 30-MAR-2006
Rhodoferax
Rhodoferax ferrireducens DSM 15236 NC_007908 4,712,337 bp 30-MAR-2006
Rhodopseudomonas
Rhodopseudomonas palustris BisB18 NC_007925 5,513,844 bp 30-MAR-2006
................ ......... BisB5 NC_007958 4,892,717 bp 14-APR-2006
................ ......... CGA009 NC_005296 5,459,213 bp 13-APR-2006
................ ......... HaA2 NC_007778 5,331,656 bp 30-MAR-2006
Rhodospirillum
Rhodospirillum rubrum ATCC 11170 NC_007643 4,352,825 bp 03-APR-2006
Rickettsia
Rickettsia bellii RML369-C NC_007940 1,522,076 bp 11-APR-2006
.......... conorii NC_003103 1,268,755 bp 03-APR-2006
.......... felis URRWXCal2 NC_007109 1,485,148 bp 03-APR-2006
.......... prowazekii NC_000963 1,111,523 bp 18-JAN-2006
.......... typhi wilmington NC_006142 1,111,496 bp 03-APR-2006
Saccharophagus
Saccharophagus degradans 2-40 NC_007912 5,057,531 bp 03-APR-2006
Salinibacter
Salinibacter ruber DSM 13855 NC_007677 3,551,823 bp 30-MAR-2006
Salmonella
Salmonella enterica Choleraesuis NC_006905 4,755,700 bp 18-JAN-2006
.......... ........ Paratypi ATCC 9150 NC_006511 4,585,229 bp 03-DEC-2005
.......... typhi NC_003198 4,809,037 bp 04-APR-2006
.......... ..... Ty2 NC_004631 4,791,961 bp 04-APR-2006
.......... typhimurium LT2 NC_003197 4,857,432 bp 07-APR-2006
Shewanella
Shewanella denitrificans OS217 NC_007954 4,545,906 bp 13-APR-2006
.......... oneidensis NC_004347 4,969,803 bp 17-JAN-2006
Shigella
Shigella boydii Sb227 NC_007613 4,519,823 bp 30-MAR-2006
........ dysenteriae NC_007606 4,369,232 bp 02-MAR-2006
........ flexneri 2a NC_004337 4,607,203 bp 03-APR-2006
........ ........ 2a 2457T NC_004741 4,599,354 bp 17-JAN-2006
........ sonnei Ss046 NC_007384 4,825,265 bp 30-MAR-2006
Silicibacter
Silicibacter pomeroyi DSS-3 NC_003911 4,109,442 bp 18-JAN-2006
Sinorhizobium
Sinorhizobium meliloti NC_003047 3,654,135 bp 03-DEC-2005
Sodalis
Sodalis glossinidius morsitans NC_007712 4,171,146 bp 30-MAR-2006
Staphylococcus
Staphylococcus aureus COL NC_002951 2,809,422 bp 17-JAN-2006
.............. ...... MW2 NC_003923 2,820,462 bp 02-DEC-2005
.............. ...... Mu50 NC_002758 2,878,529 bp 17-JAN-2006
.............. ...... N315 NC_002745 2,814,816 bp 17-JAN-2006
.............. ...... NCTC 8325 NC_007795 2,821,361 bp 30-MAR-2006
.............. ...... RF122 NC_007622 2,742,531 bp 18-JAN-2006
.............. ...... USA300 NC_007793 2,872,769 bp 30-MAR-2006
.............. ...... aureus MRSA252 NC_002952 2,902,619 bp 03-APR-2006
.............. ...... aureus MSSA476 NC_002953 2,799,802 bp 03-DEC-2005
.............. epidermidis ATCC 12228 NC_004461 2,499,279 bp 16-DEC-2005
.............. ........... RP62A NC_002976 2,616,530 bp 17-JAN-2006
.............. haemolyticus NC_007168 2,685,015 bp 18-JAN-2006
.............. saprophyticus NC_007350 2,516,575 bp 30-MAR-2006
Streptococcus
Streptococcus agalactiae 2603 NC_004116 2,160,267 bp 03-APR-2006
............. .......... A909 NC_007432 2,127,839 bp 30-MAR-2006
............. .......... NEM316 NC_004368 2,211,485 bp 09-JAN-2006
............. mutans NC_004350 2,030,921 bp 04-APR-2006
............. pneumoniae R6 NC_003098 2,038,615 bp 17-JAN-2006
............. .......... TIGR4 NC_003028 2,160,837 bp 17-JAN-2006
............. pyogenes M1 GAS NC_002737 1,852,441 bp 17-JAN-2006
............. ........ MGAS10394 NC_006086 1,899,877 bp 04-APR-2006
............. ........ MGAS315 NC_004070 1,900,521 bp 17-JAN-2006
............. ........ MGAS5005 NC_007297 1,838,554 bp 03-DEC-2005
............. ........ MGAS6180 NC_007296 1,897,573 bp 03-DEC-2005
............. ........ MGAS8232 NC_003485 1,895,017 bp 17-JAN-2006
............. ........ SSI-1 NC_004606 1,894,275 bp 17-JAN-2006
............. thermophilus CNRZ1066 NC_006449 1,796,226 bp 18-JAN-2006
............. ............ LMG 18311 NC_006448 1,796,846 bp 18-JAN-2006
Streptomyces
Streptomyces avermitilis NC_003155 9,025,608 bp 13-APR-2006
............ coelicolor NC_003888 8,667,507 bp 03-APR-2006
Sulfolobus
Sulfolobus acidocaldarius DSM 639 NC_007181 2,225,959 bp 30-MAR-2006
.......... solfataricus NC_002754 2,992,245 bp 03-DEC-2005
.......... tokodaii NC_003106 2,694,756 bp 03-DEC-2005
Symbiobacterium
Symbiobacterium thermophilum IAM14863 NC_006177 3,566,135 bp 03-DEC-2005
Synechococcus
Synechococcus CC9605 NC_007516 2,510,659 bp 30-MAR-2006
............. CC9902 NC_007513 2,234,828 bp 30-MAR-2006
............. elongatus PCC 6301 NC_006576 2,696,255 bp 18-JAN-2006
............. ......... PCC 7942 NC_007604 2,695,903 bp 03-APR-2006
............. sp WH8102 NC_005070 2,434,428 bp 17-JAN-2006
Synechocystis
Synechocystis PCC6803 NC_000911 3,573,470 bp 09-JAN-2006
Syntrophus
Syntrophus aciditrophicus SB NC_007759 3,179,300 bp 30-MAR-2006
Thermoanaerobacter
Thermoanaerobacter tengcongensis NC_003869 2,689,445 bp 03-DEC-2005
Thermobifida
Thermobifida fusca YX NC_007333 3,642,249 bp 03-APR-2006
Thermococcus
Thermococcus kodakaraensis KOD1 NC_006624 2,088,737 bp 17-JAN-2006
Thermoplasma
Thermoplasma acidophilum NC_002578 1,564,906 bp 03-DEC-2005
............ volcanium NC_002689 1,584,804 bp 03-DEC-2005
Thermosynechococcus
Thermosynechococcus elongatus NC_004113 2,593,857 bp 02-DEC-2005
Thermotoga
Thermotoga maritima NC_000853 1,860,725 bp 03-DEC-2005
Thermus
Thermus thermophilus HB27 NC_005835 1,894,877 bp 04-APR-2006
....... ............ HB8 NC_006461 1,849,742 bp 03-DEC-2005
Thiobacillus
Thiobacillus denitrificans ATCC 25259 NC_007404 2,909,809 bp 07-FEB-2006
Thiomicrospira
Thiomicrospira crunogena XCL-2 NC_007520 2,427,734 bp 31-MAR-2006
.............. denitrificans ATCC 33889 NC_007575 2,201,561 bp 04-APR-2006
Treponema
Treponema denticola ATCC 35405 NC_002967 2,843,201 bp 03-APR-2006
......... pallidum NC_000919 1,138,011 bp 03-DEC-2005
Tropheryma
Tropheryma whipplei TW08 27 NC_004551 925,938 bp 16-FEB-2006
.......... ........ Twist NC_004572 927,303 bp 03-APR-2006
Ureaplasma
Ureaplasma urealyticum NC_002162 751,719 bp 03-DEC-2005
Vibrio
Vibrio cholerae NC_002505 2,961,149 bp 18-JAN-2006
...... ........ NC_002506 1,072,315 bp 03-DEC-2005
...... fischeri ES114 NC_006840 2,906,179 bp 03-APR-2006
...... ........ ..... NC_006841 1,332,022 bp 03-APR-2006
...... parahaemolyticus NC_004603 3,288,558 bp 02-DEC-2005
...... ................ NC_004605 1,877,212 bp 17-JAN-2006
...... vulnificus CMCP6 NC_004459 3,281,945 bp 04-APR-2006
...... .......... ..... NC_004460 1,844,853 bp 03-APR-2006
...... .......... YJ016 NC_005139 3,354,505 bp 03-APR-2006
...... .......... ..... NC_005140 1,857,073 bp 03-APR-2006
Wigglesworthia
Wigglesworthia brevipalpis NC_004344 697,724 bp 02-DEC-2005
Wolbachia
Wolbachia endosymbiont of Brugia malayi TRS NC_006833 1,080,084 bp 03-DEC-2005
......... ............ of Drosophila melanogaster NC_002978 1,267,782 bp 02-DEC-2005
Wolinella
Wolinella succinogenes NC_005090 2,110,355 bp 18-JAN-2006
Xanthomonas
Xanthomonas campestris NC_003902 5,076,188 bp 02-DEC-2005
........... .......... 8004 NC_007086 5,148,708 bp 18-JAN-2006
........... .......... vesicatoria 85-10 NC_007508 5,178,466 bp 31-MAR-2006
........... citri NC_003919 5,175,554 bp 17-JAN-2006
........... oryzae KACC10331 NC_006834 4,941,439 bp 03-APR-2006
Xylella
Xylella fastidiosa NC_002488 2,679,306 bp 02-DEC-2005
....... .......... Temecula1 NC_004556 2,519,802 bp 03-APR-2006
Yersinia
Yersinia pestis CO92 NC_003143 4,653,728 bp 17-JAN-2006
........ ...... KIM NC_004088 4,600,755 bp 26-JAN-2006
........ ...... biovar Mediaevails NC_005810 4,595,065 bp 18-JAN-2006
........ pseudotuberculosis IP32953 NC_006155 4,744,671 bp 18-JAN-2006
Zymomonas
Zymomonas mobilis ZM4 NC_006526 2,056,416 bp 03-DEC-2005
Contact
If you have any problems or comments about Oriloc, please contact
Jean Lobry.
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