TPMS: Tree Pattern Matching Suite

These documentation files are hosted on the development server (github):

INSTALL
This help file explains how to do with the files you’ve downloaded. It also describe the procedure to build the program from sources. If you think your technical skills are not sufficient to choose the appropriate procedure, just take the "suggested" choices.
tpms_mkdb
This help file explains how to create you own database. Then, you will be able to perform pattern matching queries on it.
tpms_query
This help file explains how to launch tpms_query, and give details about the querying language.
tpms_computations
The purpose of the program tpms_computation is to perform large scale operations such re-rooting or making some annotations on the trees of a collection. In this document, you will find how to launch the program on a collection and what do the different options.

last update: sept 2016 — contact: thomas.bigot@pasteur.fr