Last updated on 2025-12-07 18:49:56 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.16.0 | 6.92 | 178.23 | 185.15 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.16.0 | 4.56 | 51.38 | 55.94 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.16.0 | 13.00 | 270.98 | 283.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.16.0 | 12.00 | 270.06 | 282.06 | OK | |
| r-devel-windows-x86_64 | 1.16.0 | 8.00 | 245.00 | 253.00 | OK | |
| r-patched-linux-x86_64 | 1.16.0 | 8.08 | 164.17 | 172.25 | OK | |
| r-release-linux-x86_64 | 1.16.0 | 5.86 | 161.73 | 167.59 | OK | |
| r-release-macos-arm64 | 1.16.0 | OK | ||||
| r-release-macos-x86_64 | 1.16.0 | 5.00 | 216.00 | 221.00 | OK | |
| r-release-windows-x86_64 | 1.16.0 | 10.00 | 239.00 | 249.00 | OK | |
| r-oldrel-macos-arm64 | 1.16.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.16.0 | 5.00 | 234.00 | 239.00 | OK | |
| r-oldrel-windows-x86_64 | 1.16.0 | 11.00 | 288.00 | 299.00 | OK |
Version: 1.16.0
Check: tests
Result: ERROR
Running ‘tinytest.R’ [2s/3s]
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
> # Test files in inst/tinytest/
> if (requireNamespace("tinytest", quietly = TRUE)) {
+ suppressMessages(tinytest::test_package("OmicNavigator"))
+ }
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 0 tests
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 1 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 2 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 3 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 4 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 5 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 6 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 6 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 7 tests <1b>[0;32mOK<1b>[0m
testAdd.R..................... 7 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m1.9s<1b>[0m
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests
testApp.R..................... 0 tests Error in utils::install.packages(tmpPkgDir, lib = library, repos = NULL, :
(converted from warning) installation of package '/tmp/Rtmps6UiFe/ONstudyABC' had non-zero exit status
Calls: suppressMessages ... suppressMessages -> withCallingHandlers -> installStudy -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.16.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘OmicNavigatorAPI.Rnw’ using Sweave
OmicNavigator R package version: 1.16.0
The app is not installed. Install it with installApp()
Installing study "ABC" in /tmp/RtmprbGkvM/file1606a264232c7b
Exporting study "ABC" as an R package
Note: No maintainer email was specified. Using the placeholder: Unknown <unknown@unknown>
Calculating pairwise overlaps. This may take a while...
Exported study to /tmp/RtmprbGkvM/ONstudyABC
Error: processing vignette 'OmicNavigatorAPI.Rnw' failed with diagnostics:
chunk 3 (label = test-data)
Error in utils::install.packages(tmpPkgDir, lib = library, repos = NULL, :
(converted from warning) installation of package ‘/tmp/RtmprbGkvM/ONstudyABC’ had non-zero exit status
--- failed re-building ‘OmicNavigatorAPI.Rnw’
--- re-building ‘OmicNavigatorUsersGuide.Rnw’ using Sweave
OmicNavigator R package version: 1.16.0
The app is not installed. Install it with installApp()
Installing study "vignetteExample" in /tmp/RtmpXdH5Gq/file160b625f817717
Exporting study "vignetteExample" as an R package
Note: No maintainer email was specified. Using the placeholder: Unknown <unknown@unknown>
Calculating pairwise overlaps. This may take a while...
Exported study to /tmp/RtmpXdH5Gq/ONstudyvignetteExample
Success!
Returning "default" features for modelID "modelThatDoesntExistYet"
--- finished re-building ‘OmicNavigatorUsersGuide.Rnw’
SUMMARY: processing the following file failed:
‘OmicNavigatorAPI.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc