Last updated on 2024-09-24 17:50:23 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| airGR | 1 | 12 | |
| airGRdatasets | 2 | 11 | |
| airGRdatassim | 10 | 3 | |
| airGRteaching | 8 | 5 |
Current CRAN status: ERROR: 1, OK: 12
Version: 1.7.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘V01_get_started.Rmd’ using rmarkdown
--- finished re-building ‘V01_get_started.Rmd’
--- re-building ‘V02.1_param_optim.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.1_param_optim_files/figure-html/unnamed-chunk-5-1.png
576x576 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 8701 bytes
Input file size = 9571 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7436
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7436
Output IDAT size = 7436 bytes (1265 bytes decrease)
Output file size = 7514 bytes (2057 bytes = 21.49% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.1_param_optim_files/figure-html/unnamed-chunk-6-1.png
576x576 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24294 bytes
Input file size = 25176 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22663
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22663
Output IDAT size = 22663 bytes (1631 bytes decrease)
Output file size = 22741 bytes (2435 bytes = 9.67% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.1_param_optim_files/figure-html/unnamed-chunk-7-1.png
1152x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114904 bytes
Input file size = 115150 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 109341
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 109341
Output IDAT size = 109341 bytes (5563 bytes decrease)
Output file size = 109419 bytes (5731 bytes = 4.98% decrease)
--- finished re-building ‘V02.1_param_optim.Rmd’
--- re-building ‘V02.2_param_mcmc.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.2_param_mcmc_files/figure-html/unnamed-chunk-10-1.png
576x864 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101427 bytes
Input file size = 101649 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92229
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92229
Output IDAT size = 92229 bytes (9198 bytes decrease)
Output file size = 92307 bytes (9342 bytes = 9.19% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.2_param_mcmc_files/figure-html/unnamed-chunk-11-1.png
576x864 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 83743 bytes
Input file size = 83941 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72045
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72045
Output IDAT size = 72045 bytes (11698 bytes decrease)
Output file size = 72123 bytes (11818 bytes = 14.08% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/airGR.Rcheck/vign_test/airGR/vignettes/V02.2_param_mcmc_files/figure-html/unnamed-chunk-12-1.png
576x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 106344 bytes
Input file size = 106566 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 80552
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 80552
Output IDAT size = 80552 bytes (25792 bytes decrease)
Output file size = 80630 bytes (25936 bytes = 24.34% decrease)
--- finished re-building ‘V02.2_param_mcmc.Rmd’
--- re-building ‘V03_param_sets_GR4J.Rmd’ using rmarkdown
--- finished re-building ‘V03_param_sets_GR4J.Rmd’
--- re-building ‘V04_cemaneige_hysteresis.Rmd’ using rmarkdown
--- finished re-building ‘V04_cemaneige_hysteresis.Rmd’
--- re-building ‘V05_sd_model.Rmd’ using rmarkdown
Quitting from lines 216-221 [unnamed-chunk-16] (V05_sd_model.Rmd)
Error: processing vignette 'V05_sd_model.Rmd' failed with diagnostics:
cannot get data pointer of 'NULL' objects
--- failed re-building ‘V05_sd_model.Rmd’
SUMMARY: processing the following file failed:
‘V05_sd_model.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 2, OK: 11
Version: 0.2.1
Check: data for non-ASCII characters
Result: NOTE
Note: found 17 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: NOTE: 10, OK: 3
Version: 0.1.3
Check: Rd files
Result: NOTE
checkRd: (-1) CreateInputsPert.Rd:65: Lost braces
65 | \emph{InputsPert}{[list] object of class \emph{InputsModel} containing the ensembles of perturbed model inputs required to perform data assimilation:}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 0.1.3
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
airGRdatassim.Rd: CreateCalibOptions
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Current CRAN status: NOTE: 8, OK: 5
Version: 0.3.3
Check: installed package size
Result: NOTE
installed size is 8.0Mb
sub-directories of 1Mb or more:
ShinyGR 4.3Mb
doc 3.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64