Last updated on 2026-02-10 18:51:34 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/19m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.052, elapsed: 5.730 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.977, system: 0.213, elapsed: 33.956 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.026, elapsed: 1.432 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.811, system: 1.972, elapsed: 181.654 seconds]
Computing values for grid cells...
... done. [user: 0.201, system: 0.027, elapsed: 1.536 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.478, system: 2.533, elapsed: 227.596 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.899, system: 0.278, elapsed: 12.943 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.207, system: 0.442, elapsed: 58.620 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.043, elapsed: 1.646 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.187, system: 5.863, elapsed: 198.831 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.028, elapsed: 1.365 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.495, system: 7.464, elapsed: 280.704 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.905, system: 0.205, elapsed: 12.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.277, system: 0.493, elapsed: 58.336 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.333, system: 0.043, elapsed: 1.918 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.284, system: 3.111, elapsed: 186.320 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.020, elapsed: 1.026 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.371, system: 0.427, elapsed: 5.506 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.256, system: 4.997, elapsed: 273.624 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.709, system: 0.113, elapsed: 10.330 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.023, system: 0.272, elapsed: 50.600 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.031, elapsed: 1.541 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.067, system: 2.596, elapsed: 180.975 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.016, elapsed: 0.702 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.016, system: 1.444, elapsed: 65.560 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.120, system: 5.151, elapsed: 315.987 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/18m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.822, system: 0.082, elapsed: 6.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.866, system: 0.220, elapsed: 32.116 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.233, system: 0.035, elapsed: 1.374 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.944, system: 1.743, elapsed: 178.677 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.022, elapsed: 0.907 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.754, system: 2.431, elapsed: 223.150 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.820, system: 0.105, elapsed: 8.724 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.114, system: 0.335, elapsed: 55.181 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.044, elapsed: 1.962 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.592, system: 5.504, elapsed: 196.634 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.030, elapsed: 1.041 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.721, system: 6.603, elapsed: 269.578 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.929, system: 0.275, elapsed: 9.334 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.593, system: 0.650, elapsed: 46.750 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.259, system: 0.054, elapsed: 2.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.176, system: 5.415, elapsed: 184.209 seconds]
Computing values for grid cells...
... done. [user: 0.198, system: 0.021, elapsed: 0.884 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.383, system: 0.587, elapsed: 4.070 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.492, system: 7.777, elapsed: 254.574 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.897, system: 0.181, elapsed: 7.433 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.258, system: 0.446, elapsed: 54.699 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.248, system: 0.072, elapsed: 2.169 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.556, system: 4.824, elapsed: 187.205 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.012, elapsed: 0.527 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.486, system: 1.609, elapsed: 63.487 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 34.544, system: 7.852, elapsed: 322.299 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64