Fast computation of A (pedigree), G (genomic-base), and H (A corrected by G) relationship matrices for diploid and autopolyploid species. Several methods are implemented considering additive and non-additive models.
| Version: | 3.0.1 |
| Depends: | R (≥ 3.6.0) |
| Imports: | Rcpp (≥ 1.1.0), matrixStats (≥ 1.5.0) |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | knitr, MASS, rmarkdown, testthat, zoo |
| Published: | 2026-07-22 |
| DOI: | 10.32614/CRAN.package.AGHmatrix |
| Author: | Rodrigo Amadeu [aut, cre], Luis Ferrao [aut, ctb], Thiago Oliveira [aut, ctb], Catherine Cellon [ctb], Leticia Lara [ctb], Marcio Resende [ctb], Ivone Oliveira [ctb], Patricio Munoz [ctb], Augusto Garcia [ctb] |
| Maintainer: | Rodrigo Amadeu <rramadeu at gmail.com> |
| License: | GPL-3 |
| URL: | https://github.com/rramadeu/AGHmatrix |
| NeedsCompilation: | yes |
| Citation: | AGHmatrix citation info |
| Materials: | README |
| In views: | Agriculture |
| CRAN checks: | AGHmatrix results |
| Reference manual: | AGHmatrix.html , AGHmatrix.pdf |
| Vignettes: |
AGHmatrix Tutorial (source, R code) |
| Package source: | AGHmatrix_3.0.1.tar.gz |
| Windows binaries: | r-devel: AGHmatrix_2.1.4.zip, r-release: AGHmatrix_2.1.4.zip, r-oldrel: AGHmatrix_2.1.4.zip |
| macOS binaries: | r-release (arm64): AGHmatrix_3.0.1.tgz, r-oldrel (arm64): AGHmatrix_3.0.1.tgz, r-release (x86_64): AGHmatrix_3.0.1.tgz, r-oldrel (x86_64): AGHmatrix_3.0.1.tgz |
| Old sources: | AGHmatrix archive |
| Reverse imports: | ASRgenomics, gpcp |
| Reverse suggests: | mappoly |
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