bpp-seq-omics  2.4.1
bpp::CoordinatesOutputMafIterator Member List

This is the complete list of members for bpp::CoordinatesOutputMafIterator, including all inherited members.

AbstractFilterMafIterator(MafIterator *iterator)bpp::AbstractFilterMafIteratorinline
AbstractFilterMafIterator(const AbstractFilterMafIterator &it)bpp::AbstractFilterMafIteratorinlineprivate
AbstractMafIterator()bpp::AbstractMafIteratorinline
addIterationListener(IterationListener *listener)bpp::AbstractMafIteratorinlinevirtual
analyseCurrentBlock_()bpp::CoordinatesOutputMafIteratorprivatevirtual
CoordinatesOutputMafIterator(MafIterator *iterator, std::ostream *out, const std::vector< std::string > &species, bool includeSrcSize=false)bpp::CoordinatesOutputMafIteratorinline
CoordinatesOutputMafIterator(const CoordinatesOutputMafIterator &iterator)bpp::CoordinatesOutputMafIteratorinlineprivate
currentBlock_bpp::AbstractFilterMafIteratorprotected
fireIterationMoveSignal_(const MafBlock &currentBlock)bpp::AbstractMafIteratorprotectedvirtual
fireIterationStartSignal_()bpp::AbstractMafIteratorprotectedvirtual
fireIterationStopSignal_()bpp::AbstractMafIteratorprotectedvirtual
includeSrcSize_bpp::CoordinatesOutputMafIteratorprivate
isVerbose() constbpp::AbstractMafIteratorinlinevirtual
iterationListeners_bpp::AbstractMafIteratorprotected
iterator_bpp::AbstractFilterMafIteratorprotected
logstream_bpp::AbstractFilterMafIteratorprotected
nextBlock()bpp::AbstractMafIteratorinlinevirtual
operator=(const CoordinatesOutputMafIterator &iterator)bpp::CoordinatesOutputMafIteratorinlineprivate
output_bpp::CoordinatesOutputMafIteratorprivate
setLogStream(std::shared_ptr< OutputStream > logstream)bpp::AbstractFilterMafIteratorinline
setVerbose(bool yn)bpp::AbstractMafIteratorinlinevirtual
species_bpp::CoordinatesOutputMafIteratorprivate
started_bpp::AbstractMafIteratorprotected
verbose_bpp::AbstractMafIteratorprotected
writeHeader_(std::ostream &out) constbpp::CoordinatesOutputMafIteratorprivate
~AbstractMafIterator()bpp::AbstractMafIteratorinlinevirtual
~MafIterator()bpp::MafIteratorinlinevirtual