bpp-seq-omics  2.4.1
bpp::FeatureExtractorMafIterator Member List

This is the complete list of members for bpp::FeatureExtractorMafIterator, including all inherited members.

AbstractFilterMafIterator(MafIterator *iterator)bpp::AbstractFilterMafIteratorinline
AbstractFilterMafIterator(const AbstractFilterMafIterator &it)bpp::AbstractFilterMafIteratorinlineprivate
AbstractMafIterator()bpp::AbstractMafIteratorinline
addIterationListener(IterationListener *listener)bpp::AbstractMafIteratorinlinevirtual
analyseCurrentBlock_()bpp::FeatureExtractorMafIteratorprivatevirtual
blockBuffer_bpp::FeatureExtractorMafIteratorprivate
completeOnly_bpp::FeatureExtractorMafIteratorprivate
currentBlock_bpp::AbstractFilterMafIteratorprotected
FeatureExtractorMafIterator(MafIterator *iterator, const std::string &refSpecies, const SequenceFeatureSet &features, bool complete=false, bool ignoreStrand=false)bpp::FeatureExtractorMafIteratorinline
fireIterationMoveSignal_(const MafBlock &currentBlock)bpp::AbstractMafIteratorprotectedvirtual
fireIterationStartSignal_()bpp::AbstractMafIteratorprotectedvirtual
fireIterationStopSignal_()bpp::AbstractMafIteratorprotectedvirtual
ignoreStrand_bpp::FeatureExtractorMafIteratorprivate
isVerbose() constbpp::AbstractMafIteratorinlinevirtual
iterationListeners_bpp::AbstractMafIteratorprotected
iterator_bpp::AbstractFilterMafIteratorprotected
logstream_bpp::AbstractFilterMafIteratorprotected
nextBlock()bpp::AbstractMafIteratorinlinevirtual
operator=(const AbstractFilterMafIterator &it)bpp::AbstractFilterMafIteratorinlineprivate
ranges_bpp::FeatureExtractorMafIteratorprivate
refSpecies_bpp::FeatureExtractorMafIteratorprivate
setLogStream(std::shared_ptr< OutputStream > logstream)bpp::AbstractFilterMafIteratorinline
setVerbose(bool yn)bpp::AbstractMafIteratorinlinevirtual
started_bpp::AbstractMafIteratorprotected
verbose_bpp::AbstractMafIteratorprotected
~AbstractMafIterator()bpp::AbstractMafIteratorinlinevirtual
~MafIterator()bpp::MafIteratorinlinevirtual