This is the complete list of members for bpp::OrphanSequenceFilterMafIterator, including all inherited members.

AbstractFilterMafIterator(MafIterator *iterator)	bpp::AbstractFilterMafIterator	inline
AbstractFilterMafIterator(const AbstractFilterMafIterator &it)	bpp::AbstractFilterMafIterator	inlineprivate
AbstractMafIterator()	bpp::AbstractMafIterator	inline
addIterationListener(IterationListener *listener)	bpp::AbstractMafIterator	inlinevirtual
analyseCurrentBlock_()	bpp::OrphanSequenceFilterMafIterator	privatevirtual
currentBlock_	bpp::AbstractFilterMafIterator	protected
fireIterationMoveSignal_(const MafBlock &currentBlock)	bpp::AbstractMafIterator	protectedvirtual
fireIterationStartSignal_()	bpp::AbstractMafIterator	protectedvirtual
fireIterationStopSignal_()	bpp::AbstractMafIterator	protectedvirtual
isVerbose() const	bpp::AbstractMafIterator	inlinevirtual
iterationListeners_	bpp::AbstractMafIterator	protected
iterator_	bpp::AbstractFilterMafIterator	protected
logstream_	bpp::AbstractFilterMafIterator	protected
nextBlock()	bpp::AbstractMafIterator	inlinevirtual
operator=(const OrphanSequenceFilterMafIterator &iterator)	bpp::OrphanSequenceFilterMafIterator	inlineprivate
OrphanSequenceFilterMafIterator(MafIterator *iterator, const std::vector< std::string > &species, bool strict=false, bool keep=false, bool rmDuplicates=false)	bpp::OrphanSequenceFilterMafIterator	inline
OrphanSequenceFilterMafIterator(const OrphanSequenceFilterMafIterator &iterator)	bpp::OrphanSequenceFilterMafIterator	inlineprivate
rmDuplicates_	bpp::OrphanSequenceFilterMafIterator	private
setLogStream(std::shared_ptr< OutputStream > logstream)	bpp::AbstractFilterMafIterator	inline
setVerbose(bool yn)	bpp::AbstractMafIterator	inlinevirtual
species_	bpp::OrphanSequenceFilterMafIterator	private
started_	bpp::AbstractMafIterator	protected
strict_	bpp::OrphanSequenceFilterMafIterator	private
verbose_	bpp::AbstractMafIterator	protected
~AbstractMafIterator()	bpp::AbstractMafIterator	inlinevirtual
~MafIterator()	bpp::MafIterator	inlinevirtual