bpp::PlinkOutputMafIterator Member List

This is the complete list of members for bpp::PlinkOutputMafIterator, including all inherited members.

AbstractFilterMafIterator(MafIterator *iterator)	bpp::AbstractFilterMafIterator	inline
AbstractFilterMafIterator(const AbstractFilterMafIterator &it)	bpp::AbstractFilterMafIterator	inlineprivate
AbstractMafIterator()	bpp::AbstractMafIterator	inline
addIterationListener(IterationListener *listener)	bpp::AbstractMafIterator	inlinevirtual
analyseCurrentBlock_()	bpp::PlinkOutputMafIterator	inlinevirtual
chrCodes_	bpp::PlinkOutputMafIterator	private
currentBlock_	bpp::AbstractFilterMafIterator	protected
currentChr_	bpp::PlinkOutputMafIterator	private
currentCode_	bpp::PlinkOutputMafIterator	private
fireIterationMoveSignal_(const MafBlock &currentBlock)	bpp::AbstractMafIterator	protectedvirtual
fireIterationStartSignal_()	bpp::AbstractMafIterator	protectedvirtual
fireIterationStopSignal_()	bpp::AbstractMafIterator	protectedvirtual
init_()	bpp::PlinkOutputMafIterator	private
isVerbose() const	bpp::AbstractMafIterator	inlinevirtual
iterationListeners_	bpp::AbstractMafIterator	protected
iterator_	bpp::AbstractFilterMafIterator	protected
lastPosition_	bpp::PlinkOutputMafIterator	private
logstream_	bpp::AbstractFilterMafIterator	protected
map3_	bpp::PlinkOutputMafIterator	private
nextBlock()	bpp::AbstractMafIterator	inlinevirtual
operator=(const PlinkOutputMafIterator &iterator)	bpp::PlinkOutputMafIterator	inlineprivate
outputMap_	bpp::PlinkOutputMafIterator	private
outputPed_	bpp::PlinkOutputMafIterator	private
parseBlock_(std::ostream &out, const MafBlock &block)	bpp::PlinkOutputMafIterator	private
ped_	bpp::PlinkOutputMafIterator	private
PlinkOutputMafIterator(MafIterator *iterator, std::ostream *outPed, std::ostream *outMap, const std::vector< std::string > &species, const std::string &reference, bool map3=false, bool recodeChr=false)	bpp::PlinkOutputMafIterator	inline
PlinkOutputMafIterator(const PlinkOutputMafIterator &iterator)	bpp::PlinkOutputMafIterator	inlineprivate
recodeChr_	bpp::PlinkOutputMafIterator	private
refSpecies_	bpp::PlinkOutputMafIterator	private
setLogStream(std::shared_ptr< OutputStream > logstream)	bpp::AbstractFilterMafIterator	inline
setVerbose(bool yn)	bpp::AbstractMafIterator	inlinevirtual
species_	bpp::PlinkOutputMafIterator	private
started_	bpp::AbstractMafIterator	protected
verbose_	bpp::AbstractMafIterator	protected
writePedToFile_(std::ostream &out)	bpp::PlinkOutputMafIterator	private
~AbstractMafIterator()	bpp::AbstractMafIterator	inlinevirtual
~MafIterator()	bpp::MafIterator	inlinevirtual