- c -

• Categorizer() : bpp::SiteFrequencySpectrumMafStatistics::Categorizer
• CharacterCountsMafStatistics() : bpp::CharacterCountsMafStatistics
• ChromosomeMafIterator() : bpp::ChromosomeMafIterator
• clear() : bpp::SequenceFeatureSet
• clone() : bpp::BasicSequenceFeature , bpp::MafBlock , bpp::MafSequence , bpp::SeqRange , bpp::SequenceFeature
• cloneMeta() : bpp::MafSequence
• compute() : bpp::AlignmentScoreMafStatistics , bpp::BlockLengthMafStatistics , bpp::BlockSizeMafStatistics , bpp::CharacterCountsMafStatistics , bpp::FourSpeciesPatternCountsMafStatistics , bpp::MafStatistics , bpp::PairwiseDivergenceMafStatistics , bpp::PolymorphismMafStatistics , bpp::SequenceDiversityMafStatistics , bpp::SequenceLengthMafStatistics , bpp::SiteFrequencySpectrumMafStatistics , bpp::SiteMafStatistics
• ConcatenateMafIterator() : bpp::ConcatenateMafIterator
• CoordinatesOutputMafIterator() : bpp::CoordinatesOutputMafIterator
• CoordinateTranslatorMafIterator() : bpp::CoordinateTranslatorMafIterator
• CsvStatisticsOutputIterationListener() : bpp::CsvStatisticsOutputIterationListener