Loop over all sequences in a SequenceContainer. More...

#include <Bpp/Seq/Container/SequenceContainerIterator.h>

Inheritance diagram for bpp::SimpleSequenceContainerIterator:

Collaboration diagram for bpp::SimpleSequenceContainerIterator:

Public Member Functions
	SimpleSequenceContainerIterator (const OrderedSequenceContainer &sites)

virtual	~SimpleSequenceContainerIterator ()

const Sequence *	nextSequence ()

bool	hasMoreSequences () const

Protected Attributes
const OrderedSequenceContainer *	sequences_

size_t	currentPosition_

Detailed Description

Loop over all sequences in a SequenceContainer.

Definition at line 82 of file SequenceContainerIterator.h.

Constructor & Destructor Documentation

◆ SimpleSequenceContainerIterator()

SimpleSequenceContainerIterator::SimpleSequenceContainerIterator ( const OrderedSequenceContainer & sites )

Definition at line 60 of file SequenceContainerIterator.cpp.

◆ ~SimpleSequenceContainerIterator()

virtual bpp::SimpleSequenceContainerIterator::~SimpleSequenceContainerIterator ( )

inlinevirtual

Definition at line 87 of file SequenceContainerIterator.h.

Member Function Documentation

◆ hasMoreSequences()

bool SimpleSequenceContainerIterator::hasMoreSequences ( ) const

virtual

Implements bpp::ConstSequenceIterator.

Definition at line 70 of file SequenceContainerIterator.cpp.

References bpp::AbstractSequenceContainerIterator::currentPosition_, bpp::SequencedValuesContainer::getNumberOfSequences(), and bpp::AbstractSequenceContainerIterator::sequences_.

◆ nextSequence()

const Sequence * SimpleSequenceContainerIterator::nextSequence ( )

virtual

Implements bpp::ConstSequenceIterator.

Definition at line 63 of file SequenceContainerIterator.cpp.

References bpp::AbstractSequenceContainerIterator::currentPosition_, bpp::OrderedSequenceContainer::getSequence(), and bpp::AbstractSequenceContainerIterator::sequences_.

Member Data Documentation

◆ currentPosition_

size_t bpp::AbstractSequenceContainerIterator::currentPosition_

protectedinherited

Definition at line 59 of file SequenceContainerIterator.h.

Referenced by hasMoreSequences(), nextSequence(), and bpp::AbstractSequenceContainerIterator::operator=().

◆ sequences_

const OrderedSequenceContainer* bpp::AbstractSequenceContainerIterator::sequences_