bpp::TemplateOSequenceStream< SequenceType > Class Template Reference

The OSequenceStream interface. More...

#include <Bpp/Seq/Io/OSequenceStream.h>

Inheritance diagram for bpp::TemplateOSequenceStream< SequenceType >:

Collaboration diagram for bpp::TemplateOSequenceStream< SequenceType >:

Public Member Functions
	TemplateOSequenceStream ()
virtual	~TemplateOSequenceStream ()
virtual void	writeSequence (std::ostream &output, const SequenceType &seq) const =0
	Read sequence from stream. More...
virtual const std::string	getDataType () const=0
virtual const std::string	getFormatName () const=0
virtual const std::string	getFormatDescription () const=0

Detailed Description

template<class SequenceType>
class bpp::TemplateOSequenceStream< SequenceType >

The OSequenceStream interface.

Interface for streaming sequences output.

Author

Sylvain Gaillard

Definition at line 24 of file OSequenceStream.h.

Constructor & Destructor Documentation

TemplateOSequenceStream()

template<class SequenceType >

bpp::TemplateOSequenceStream< SequenceType >::TemplateOSequenceStream ( )

inline

Definition at line 28 of file OSequenceStream.h.

~TemplateOSequenceStream()

template<class SequenceType >

virtual bpp::TemplateOSequenceStream< SequenceType >::~TemplateOSequenceStream ( )

inlinevirtual

Definition at line 29 of file OSequenceStream.h.

Member Function Documentation

writeSequence()

template<class SequenceType >

virtual void bpp::TemplateOSequenceStream< SequenceType >::writeSequence ( std::ostream &  output, const SequenceType &  seq  ) const

pure virtual

Read sequence from stream.

Read one sequence from a stream.

Parameters

output	The stream where write.
seq	The sequence to write.

Exceptions

Exception

IOExecption.

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The documentation for this class was generated from the following file:

• Bpp/Seq/Io/OSequenceStream.h