Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.
Genome size (bp): 4411532
Number of genes 3965
Oriloc predictions: Origin 0 kb Terminus 2186 kb
Worning et al., 2006: Origin 2 kb Terminus 2128 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 60.169 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.76 kb
Consensus predictions: Origin 0 kb Terminus 2186 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1138 | NA | 2126 |
| GC-skew reverse | 2811 | NA | 2224 |
| 3230 | NA | 3004 | |
| 3790 | NA | 4052 | |
| AT-skew forward | 822 | NA | 1564 |
| 1122 | NA | 2100 | |
| AT-skew reverse | 2819 | NA | 2236 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1138 (2125.86 kb) | leading | -0.019 |
| 1139 (2127.993 kb) | 1995 (4410.929 kb) | lagging | -0.096 | |
| GC-skew reverse | 1996 (0 kb) | 2811 (2224.267 kb) | leading | 0.108 |
| 2812 (2225.0275 kb) | 3230 (3004.0155 kb) | lagging | 0.02 | |
| 3231 (3004.844 kb) | 3790 (4052.2255 kb) | lagging | 0.011 | |
| 3791 (4053.7815 kb) | 3965 (4410.929 kb) | lagging | -0.019 | |
| AT-skew forward | 1 (0 kb) | 822 (1563.5395 kb) | leading | -0.185 |
| 823 (1564.332 kb) | 1122 (2099.6925 kb) | leading | -0.125 | |
| 1123 (2100.333 kb) | 1995 (4410.929 kb) | lagging | -0.038 | |
| AT-skew reverse | 1996 (0 kb) | 2819 (2235.807 kb) | leading | 0.037 |
| 2820 (2236.2845 kb) | 3965 (4410.929 kb) | lagging | 0.18 |
More G than C on the leading strand for replication.