Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
Genome size (bp): 1010023
Number of genes 812
Oriloc predictions: Origin 0 kb Terminus 509 kb
Worning et al., 2006: Origin 0 kb Terminus 536 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1009.879 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.68 kb
Consensus predictions: Origin 0 kb Terminus 509 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 107 | 0.02 | 177 |
| GC-skew reverse | 545 | 0.02 | 567 |
| AT-skew reverse | 691 | 0.02 | 804 |
| 708 | 0.01333 | 813 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 107 (176.665 kb) | leading | 0.154 |
| 108 (177.2035 kb) | 411 (1009.728 kb) | NA | 0.042 | |
| GC-skew reverse | 412 (0 kb) | 545 (567.025 kb) | NA | -0.004 |
| 546 (568.0105 kb) | 812 (1009.728 kb) | lagging | -0.106 | |
| AT-skew reverse | 412 (0 kb) | 691 (804.2 kb) | NA | 0.028 |
| 692 (805.316 kb) | 708 (812.5855 kb) | lagging | -0.101 | |
| 709 (813.0695 kb) | 812 (1009.728 kb) | lagging | 0.038 |