Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Genome size (bp): 4214630
Number of genes 4102
Oriloc predictions: Origin 0 kb Terminus 1961 kb
Worning et al., 2006: Origin 0 kb Terminus 1947 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3793.177 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 1961 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 376 | NA | 532 |
| 1362 | NA | 2035 | |
| GC-skew reverse | 2426 | NA | 1999 |
| AT-skew forward | 667 | NA | 969 |
| AT-skew reverse | 3317 | NA | 3057 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 376 (532.2965 kb) | leading | 0.063 |
| 377 (532.8795 kb) | 1362 (2035.118 kb) | leading | 0.107 | |
| 1363 (2037.905 kb) | 1941 (4214.413 kb) | lagging | -0.041 | |
| GC-skew reverse | 1942 (0 kb) | 2426 (1998.7935 kb) | leading | 0.046 |
| 2427 (2000.3105 kb) | 4102 (4214.413 kb) | lagging | -0.096 | |
| AT-skew forward | 1 (0 kb) | 667 (969.4515 kb) | leading | -0.045 |
| 668 (969.9775 kb) | 1941 (4214.413 kb) | NA | -0.013 | |
| AT-skew reverse | 1942 (0 kb) | 3317 (3057.1755 kb) | NA | 0.017 |
| 3318 (3058.46 kb) | 4102 (4214.413 kb) | lagging | 0.046 |