Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Genome size (bp): 4222645
Number of genes 4196
Oriloc predictions: Origin 0 kb Terminus 2119 kb
Worning et al., 2006: Origin 0 kb Terminus 2013 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3842.814 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.98 kb
Consensus predictions: Origin 0 kb Terminus 2119 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 1206 | NA | 1724 |
| 1484 | NA | 2122 | |
| GC-skew reverse | 2595 | NA | 2101 |
| AT-skew forward | 448 | NA | 675 |
| AT-skew reverse | 3181 | NA | 2809 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 1206 (1724.366 kb) | leading | 0.045 |
| 1207 (1725.8435 kb) | 1484 (2122.2405 kb) | leading | 0.033 | |
| 1485 (2122.782 kb) | 2029 (4222.316 kb) | lagging | -0.058 | |
| GC-skew reverse | 2030 (0 kb) | 2595 (2101.438 kb) | leading | 0.064 |
| 2596 (2102.324 kb) | 4196 (4222.316 kb) | lagging | -0.036 | |
| AT-skew forward | 1 (0 kb) | 448 (674.994 kb) | leading | -0.025 |
| 449 (677.095 kb) | 2029 (4222.316 kb) | NA | 0.005 | |
| AT-skew reverse | 2030 (0 kb) | 3181 (2808.6135 kb) | NA | -0.017 |
| 3182 (2809.302 kb) | 4196 (4222.316 kb) | lagging | 0.018 |