Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.
Genome size (bp): 3397754
Number of genes 2942
Oriloc predictions: Origin 9 kb Terminus 1736 kb
Worning et al., 2006: Origin 0 kb Terminus 1692 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 2950.113 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.33 kb, 3157.04 kb
Consensus predictions: Origin 9 kb Terminus 1736 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 120 | NA | 294 |
| 852 | NA | 1727 | |
| GC-skew reverse | 1869 | NA | 1091 |
| 2119 | NA | 1701 | |
| AT-skew forward | 894 | NA | 1886 |
| AT-skew reverse | 2158 | NA | 1764 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 120 (293.8535 kb) | leading | 0.094 |
| 121 (295.0025 kb) | 852 (1727.19 kb) | leading | 0.17 | |
| 853 (1730.3415 kb) | 1453 (3397.646 kb) | lagging | -0.089 | |
| GC-skew reverse | 1454 (0 kb) | 1869 (1091.313 kb) | leading | 0.1 |
| 1870 (1091.925 kb) | 2119 (1700.811 kb) | leading | 0.04 | |
| 2120 (1702.1205 kb) | 2942 (3397.646 kb) | lagging | -0.163 | |
| AT-skew forward | 1 (0 kb) | 894 (1885.6575 kb) | leading | -0.122 |
| 895 (1889.512 kb) | 1453 (3397.646 kb) | lagging | -0.047 | |
| AT-skew reverse | 1454 (0 kb) | 2158 (1763.6855 kb) | leading | 0.053 |
| 2159 (1765.303 kb) | 2942 (3397.646 kb) | lagging | 0.119 |
More G than C on the leading strand for replication.