Rearranged Oriloc output example: Previous Index Next
Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.
Genome size (bp): 3503610
Number of genes 3027
Oriloc predictions: Origin 0 kb Terminus 1702 kb
Worning et al., 2006: Origin NA kb Terminus NA kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 3037.373 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 1702 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 159 | NA | 329 |
| 859 | NA | 1698 | |
| GC-skew reverse | 2130 | NA | 1665 |
| 2939 | NA | 3359 | |
| AT-skew forward | 897 | NA | 1836 |
| AT-skew reverse | 2237 | NA | 1859 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 159 (329.259 kb) | leading | 0.084 |
| 160 (331.2545 kb) | 859 (1698.127 kb) | leading | 0.178 | |
| 860 (1699.195 kb) | 1515 (3503.062 kb) | lagging | -0.078 | |
| GC-skew reverse | 1516 (0 kb) | 2130 (1665.302 kb) | leading | 0.095 |
| 2131 (1666.756 kb) | 2939 (3358.807 kb) | lagging | -0.165 | |
| 2940 (3360.682 kb) | 3027 (3503.062 kb) | lagging | -0.088 | |
| AT-skew forward | 1 (0 kb) | 897 (1835.7645 kb) | leading | -0.115 |
| 898 (1839.9685 kb) | 1515 (3503.062 kb) | lagging | -0.044 | |
| AT-skew reverse | 1516 (0 kb) | 2237 (1859.485 kb) | leading | 0.054 |
| 2238 (1864.392 kb) | 3027 (3503.062 kb) | lagging | 0.122 |
More G than C on the leading strand for replication.