Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1895017
Number of genes 1845
Oriloc predictions: Origin 0 kb Terminus 943 kb
Worning et al., 2006: Origin 1875 kb Terminus 959 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1814.237 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 943 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 757 | NA | 948 |
| GC-skew reverse | 1123 | NA | 946 |
| 1409 | NA | 1270 | |
| 1751 | NA | 1714 | |
| AT-skew forward | 220 | NA | 298 |
| 495 | NA | 616 | |
| 741 | NA | 926 | |
| AT-skew reverse | 1198 | NA | 1047 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 757 (948.168 kb) | leading | 0.045 |
| 758 (949.3205 kb) | 962 (1895.013 kb) | lagging | -0.211 | |
| GC-skew reverse | 963 (0 kb) | 1123 (945.8655 kb) | leading | 0.182 |
| 1124 (950.4765 kb) | 1409 (1269.9755 kb) | lagging | -0.075 | |
| 1410 (1271.305 kb) | 1751 (1714.322 kb) | lagging | -0.047 | |
| 1752 (1716.0695 kb) | 1845 (1895.013 kb) | lagging | -0.016 | |
| AT-skew forward | 1 (0 kb) | 220 (297.7325 kb) | leading | -0.139 |
| 221 (298.2395 kb) | 495 (615.8565 kb) | leading | -0.1 | |
| 496 (618.0975 kb) | 741 (926.153 kb) | leading | -0.142 | |
| 742 (929.3155 kb) | 962 (1895.013 kb) | lagging | -0.129 | |
| AT-skew reverse | 963 (0 kb) | 1198 (1046.7175 kb) | NA | 0.139 |
| 1199 (1047.3515 kb) | 1845 (1895.013 kb) | lagging | 0.091 |
More G than C on the leading strand for replication.