Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus.
Genome size (bp): 1836467
Number of genes 1877
Oriloc predictions: Origin 0 kb Terminus 966 kb
Worning et al., 2006: Origin 1816 kb Terminus 968 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 1756.74 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.88 kb
Consensus predictions: Origin 0 kb Terminus 966 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 815 | NA | 954 |
| GC-skew reverse | 1224 | NA | 969 |
| 1780 | NA | 1683 | |
| 1806 | NA | 1712 | |
| AT-skew forward | 201 | NA | 253 |
| 640 | NA | 775 | |
| 688 | NA | 814 | |
| AT-skew reverse | 1488 | NA | 1323 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 815 (953.615 kb) | leading | 0.056 |
| 816 (955.2795 kb) | 1039 (1836.433 kb) | lagging | -0.18 | |
| GC-skew reverse | 1040 (0 kb) | 1224 (969.27 kb) | leading | 0.173 |
| 1225 (970.7405 kb) | 1780 (1682.9685 kb) | lagging | -0.073 | |
| 1781 (1684.1585 kb) | 1806 (1712.3265 kb) | lagging | 0.264 | |
| 1807 (1713.614 kb) | 1877 (1836.433 kb) | lagging | -0.111 | |
| AT-skew forward | 1 (0 kb) | 201 (252.7765 kb) | leading | -0.133 |
| 202 (253.7185 kb) | 640 (775.357 kb) | leading | -0.102 | |
| 641 (776.5095 kb) | 688 (814.0605 kb) | leading | 0.054 | |
| 689 (814.23 kb) | 1039 (1836.433 kb) | NA | -0.135 | |
| AT-skew reverse | 1040 (0 kb) | 1488 (1323.2475 kb) | NA | 0.13 |
| 1489 (1324.597 kb) | 1877 (1836.433 kb) | lagging | 0.091 |