Rearranged Oriloc output example: Previous Index Next
Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.
Genome size (bp): 5227293
Number of genes 5309
Oriloc predictions: Origin 0 kb Terminus 2503 kb
Worning et al., 2006: Origin 1 kb Terminus 2506 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 5199.31 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 1.08 kb
Consensus predictions: Origin 0 kb Terminus 2503 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 380 | 0.01667 | 513 |
| 1824 | 0 | 2495 | |
| GC-skew reverse | 3185 | 0 | 2513 |
| AT-skew forward | 1854 | 0.00667 | 2588 |
| AT-skew reverse | 3337 | 0.00667 | 2696 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 380 (513.29 kb) | leading | 0.231 |
| 381 (514.404 kb) | 1824 (2494.726 kb) | leading | 0.36 | |
| 1825 (2495.1445 kb) | 2541 (5227.135 kb) | lagging | -0.114 | |
| GC-skew reverse | 2542 (0 kb) | 3185 (2512.6575 kb) | leading | 0.111 |
| 3186 (2513.8755 kb) | 5309 (5227.135 kb) | lagging | -0.311 | |
| AT-skew forward | 1 (0 kb) | 1854 (2588.41 kb) | leading | 0.039 |
| 1855 (2592.57 kb) | 2541 (5227.135 kb) | lagging | 0.005 | |
| AT-skew reverse | 2542 (0 kb) | 3337 (2696.231 kb) | NA | -0.001 |
| 3338 (2696.93 kb) | 5309 (5227.135 kb) | lagging | -0.038 |
More G than C on the leading strand for replication.